Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00311 ATGGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCAAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAGTTTTGGTTTTCCACCAAATTTCAACCAGTCATCCTCTGTTCCAAACTTTCAACCATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGACATGATAGTTTCTAATGAAGTCGCTCCAAATTCAGAGGATTCAACTCCTAAGAGTAGGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAGGAATTATATGCATGTGGGAAGAATGTTAGATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACGTTATGTTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCGCGAGAGTGATGCATGTGGCTCAAACACTGTAGAATCCAGTGCTCGTCCTATAGGAAGGGAGGCAGCTAAAAAAAAGGGTAAAAAGAAAAGCAAGGATAAAACCAAGAAAATGAAGATGTATCTAAAGCTAACTTCCGAAGAGCATCTAGATGACCGGAAGAACCAGCTGTTGAAAAAGTTGGAAGCCTACAATCAAAATCGTGAAATTGAAGAAAATTATATAGTCAATCGATTTAGAGAGCGTAGAAACAAAATATCGGAAGATAATGCACCTCGTAGTAGAAAATATCTCAATAGAGATCATGCAGCGGCAAACCAAAGACTAATTGACGACTACTTTGCCAATGAGCCTACATATGGCGATGCAATGTTTCGTCGTCGGTACCGGATGAAAAAAAATGTTTTCCTTCGAATCGTTGGGGACCTTTCAAGTAGTGATAACTACTTCACCCAGCGAGTTGATGCAGCCAATAAAGAAGGTATATCACCCTTAGCAAAATGTACCACAGCAATGCGAATGTTAGCATATGGTGTTGCAGCAGATGCGGTCGATGAGTACATCAAAATAGTAGGTACTACAGCATTGGAGTTGTATCTGAGAGCACCAACCCAAGATGACCTGCAAAGAATACTGCATGTTAGTGAAATGCGGGGGTTCCCAGGGATGATTGGGAGTATTGACTGCATGCACTGGGAGTGGAAAAATTGTCCTAAAGCATGGGAAGGACAGTTTACTAGAGGGGATAAGGGAACCACCACAGTTATTCTTGAAGCAGTTGGAAAGGCTCCAAGTGTGAATTTCTTTGTGAATCAACGTCCATATAATATGGCATACTATCTAGCTGATGGTATCTACCCTTCTTATCCAACTTTCGTCAAATCGATTAGACTTCCTCAAAGTGAACCCGATAAATTATTTGCAAAATTTCAGGAGGGATGTCGGAAGGACATCGAACGTGCATTTGGAGTGCTCCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGCTTGTGGGACATAGCTGATTTGGGTATCATCATGAGGTCATGCATCATATTACATAATATGATTGTTGAGGATGAACGAGATTCATATTCTCAACGTTGGACCGATTTTGAGCAATCTGAGGAAAGTGGATCTAGTGCACCACAACCATACTCGACCGAGGTGTTACCCGCTTTTGCAAATCATGTGCGTGCTAGATCAGAGTTCCGTGATCCAAATGTTCATCAAGAATTGCAAGCTGATCTAGTGAAGCACATATGGACAAAGTTTGGAATGTTCCGTGATTGA 2127 0.4081 MDPNNHFNTQNSANFPFNQNPNNFQNPNNYQNPNYYQNPNQFSNQHPQNIPSFGFPPNFNQSSSVPNFQPYYGSMPRNPSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGDMIVSNEVAPNSEDSTPKSRKTQQPAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYCNEHCSFDPPRDGPACRNRFNYMNKVLGKWIGAYDGAKRMQGSGWSENDVLAKAQELYACGKNVRFTLMEEWHALRDQPRYVSQVGGNIGSGSSGSKRSRESDACGSNTVESSARPIGREAAKKKGKKKSKDKTKKMKMYLKLTSEEHLDDRKNQLLKKLEAYNQNREIEENYIVNRFRERRNKISEDNAPRSRKYLNRDHAAANQRLIDDYFANEPTYGDAMFRRRYRMKKNVFLRIVGDLSSSDNYFTQRVDAANKEGISPLAKCTTAMRMLAYGVAADAVDEYIKIVGTTALELYLRAPTQDDLQRILHVSEMRGFPGMIGSIDCMHWEWKNCPKAWEGQFTRGDKGTTTVILEAVGKAPSVNFFVNQRPYNMAYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKFQEGCRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDERDSYSQRWTDFEQSEESGSSAPQPYSTEVLPAFANHVRARSEFRDPNVHQELQADLVKHIWTKFGMFRD 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00311 708 MobiDBLite consensus disorder prediction 122 141 - -
Vivi2g00311 708 MobiDBLite consensus disorder prediction 299 314 - -
Vivi2g00311 708 MobiDBLite consensus disorder prediction 262 292 - -
Vivi2g00311 708 MobiDBLite consensus disorder prediction 1 29 - -
Vivi2g00311 708 MobiDBLite consensus disorder prediction 261 314 - -
Vivi2g00311 708 Pfam Plant transposon protein 538 642 IPR006912 -
Vivi2g00311 708 Coils Coil 324 351 - -
Vivi2g00311 708 PANTHER OS12G0169200 PROTEIN 339 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00311 Vivi-Chr2 9971893 9975160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00311 85 306 Glutathione S-transferase Gene Family AT5G41240 27.801 1.52e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00311 - - vvo:131633225 1317.75