Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00286 ATGGGAGTAAAAGAGATGAAAAGAGGGAACAAGAAAGTAAATAATAAAATGGTCCCGGCGGACACCGACTGCCTCGAACATGCTGCCGCGTCCACTACCGCCGCCGCACATCCGCCGGCACGTCAAAACGTTGTGATTTCTTACAAAGATCACGATTCTCTCTCCAGCGGTGGCGGCATCAGCATTCTATCTGGAAGTCGAAATGGAAAGATCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGAGCTTCAATGGAGGATTTCTTTGAGGCCAAAATATCAGAGGTTGATGGTCAGATGGTTGCCTTTTTTGGTGTTTTTGATGGCCACGGAGGTTCACAGACTGCAGAATACCTGAGAAATAATTTATTCAAAAACTTGAGTAGCCATCCTGACTTCATCAAAGACACTAAGACAGCTATTGTCGAAGCATTTAAACAAACAGACATTGATTACCTCAATGCGGAAAAGGGGCATCAAAGAGATGCTGGATCCACTGCATCAACAGCTGTATTGTTAGGCGACCGAATTCTTGTTGCAAATGTTGGTGATTCCCGAGTAGTTGCATCTAGAGCTGGTTTAGCTGTTCCTTTATCTATTGATCACAAACCAGATAGATCTGATGAGCGTCGAAGGATTGAACAAGCTGGGGGATTCGTATTATGGGCAGGAACATGGAGGGTCGGTGGCGTTCTTGCCGTGTCCCGTGCATTTGGAGACAAGTTTCTTAGACCATATGTTGTTGCCGAACCAGAAATTCAGGAGGAAGACATCGAAGGCGTTGATTTTTTAATAGTCGCTAGCGACGGTCTTTGGAATGTTATATCAAACAATGAGGCGGTGTCTTTAGTACAAAATATCACTGATGCAGAAGCTGCATCTAAAGCACTTATTAAAGAAGCTTATACTCGAGGAAGCTCAGACAACATCACCTGCGTCGTTGTTCGATTTGATCCATCATGA 963 0.4424 MGVKEMKRGNKKVNNKMVPADTDCLEHAAASTTAAAHPPARQNVVISYKDHDSLSSGGGISILSGSRNGKISYGYSSFKGKRASMEDFFEAKISEVDGQMVAFFGVFDGHGGSQTAEYLRNNLFKNLSSHPDFIKDTKTAIVEAFKQTDIDYLNAEKGHQRDAGSTASTAVLLGDRILVANVGDSRVVASRAGLAVPLSIDHKPDRSDERRRIEQAGGFVLWAGTWRVGGVLAVSRAFGDKFLRPYVVAEPEIQEEDIEGVDFLIVASDGLWNVISNNEAVSLVQNITDAEAASKALIKEAYTRGSSDNITCVVVRFDPS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00286 320 CDD PP2Cc 71 317 IPR001932 -
Vivi2g00286 320 Pfam Protein phosphatase 2C 73 310 IPR001932 -
Vivi2g00286 320 PANTHER PROTEIN PHOSPHATASE 52 317 IPR015655 GO:0004722|GO:0006470
Vivi2g00286 320 SUPERFAMILY PP2C-like 65 318 IPR036457 -
Vivi2g00286 320 ProSitePatterns PPM-type phosphatase domain signature. 103 111 IPR000222 GO:0043169
Vivi2g00286 320 Gene3D - 64 320 IPR036457 -
Vivi2g00286 320 ProSiteProfiles PPM-type phosphatase domain profile. 72 317 IPR001932 -
Vivi2g00286 320 SMART PP2C_4 62 315 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00286 Vivi-Chr2 9058049 9061499 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00286 44 320 PP2C-type Phosphatase Gene Family AT1G43900 70.758 7.46e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00286 K17506 - gmx:100776867 492.271