Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00270 ATGTCCAAAACCACAAACATTACAATTAATATATTCTATTTTGCAACAATGGCTTTATGTTCTTCATTTTGGGTTCTATTGATTACATATATGGTAATTGGTATTCGTACTAATTCAGCTTCTGATTTATCAGCTACATTCTACGATAAATCTTGTCCGAAAGCTCTTCGCACAATCAGGAAAACAGTTGAAGATGCTGTCTCTAAGGAGAATCGCATGGGAGCTTCCTTGCTTCGACTCCATTTTCACGACTGCTTTGTTCTCGGTTGTGATGCATCCGTGTTGTTAGATGATACTGCAAATTTCACGGGCGAAAAGAAAGCGTTCCCAAACGCGAACTCGCTAAGGGGTTTTGAGGTGATAGACAACATCAAAAATCAGTTAGAGAAAATGTGTCCTAAAGTTGTTTCATGTGCTGATATCTTAACCCTTGCTGCCAGAGATGCTGTTGCTGCTCTTGGTGGACAAAGATGGAATGTACTATTAGGAAGAAGAGATTCAACAACAGCAAGCTTAGATATATCAAATTCTGACTTACCTGGTCCTTCTTTGGATCTTGATGCCCTTATCACTGCTTTCGCCAAGAAAAATTTCACTACAGCAGAAATGGTTACTTTATCAGGTGCTCACACAATCGGCGAAATAAGGTGCCGATTTTTCAGATCAAGGATATACAATGAAACAAACATAGACCCTAAATTTGCTGCAACAATGCAAGCCCTATGTCCTTTTGAAGGAGGTGATGATGATTTTTCTCCATTTGACTCAACCACACCGAATAATTTCGACAACGCTTTCTACGCTAACTTGGTCAAAAACAAAGGTCTAGTACACTCTGATCAACAGCTATTTGCTAATGCAACATCAATCACTAGCTCTCAAGTAAGAAGATATAGCAGAAACATGGGAGTTTTCAAGAAAGATTTTGCAGATGCAATGTTTAAGATGACAATGCTTAGTCCACTTACTGGTAATGATGGTCAGATTAGGACTAATTGCAGATTTGTTAATGCTCCATAA 1020 0.3853 MSKTTNITINIFYFATMALCSSFWVLLITYMVIGIRTNSASDLSATFYDKSCPKALRTIRKTVEDAVSKENRMGASLLRLHFHDCFVLGCDASVLLDDTANFTGEKKAFPNANSLRGFEVIDNIKNQLEKMCPKVVSCADILTLAARDAVAALGGQRWNVLLGRRDSTTASLDISNSDLPGPSLDLDALITAFAKKNFTTAEMVTLSGAHTIGEIRCRFFRSRIYNETNIDPKFAATMQALCPFEGGDDDFSPFDSTTPNNFDNAFYANLVKNKGLVHSDQQLFANATSITSSQVRRYSRNMGVFKKDFADAMFKMTMLSPLTGNDGQIRTNCRFVNAP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00270 339 CDD secretory_peroxidase 43 336 IPR033905 GO:0004601|GO:0042744
Vivi2g00270 339 ProSiteProfiles Plant heme peroxidase family profile. 42 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 Gene3D - 46 334 - -
Vivi2g00270 339 PANTHER PEROXIDASE 72-RELATED 41 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 FunFam Peroxidase 180 316 - -
Vivi2g00270 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Vivi2g00270 339 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Vivi2g00270 339 SUPERFAMILY Heme-dependent peroxidases 42 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi2g00270 339 Gene3D Peroxidase, domain 2 180 316 - -
Vivi2g00270 339 FunFam Peroxidase 46 183 - -
Vivi2g00270 339 Pfam Peroxidase 60 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00270 Vivi-Chr2 7965115 7966733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00270 41 337 Peroxidase AT5G05340 54.849 5.34e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00270 K00430 - gmx:100802244 474.552