Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00234 ATGGTATCGGCTACAATTAGGCGTATCGTGTCACCTTGTTGGAGGCCATCTAGTGAGGGCGATTCTAGTAGGTATGGCGATGGGAGTGGACGTTCCGATGGTTTGTTGTGGTATAAAGATTCTGGAAGACATGCAAGCGGTGAATTCTCAATGGCGGTTGTTCAAGCAAACAATTTGTTGGAGGATCATAGCCAGGTTGAATCAGGACCCATGAGCTTAACTGAAGGAAGTCCTCATGGTACTTTTGTTGGTGTTTATGATGGCCATGGAGGTCCGGAAACTGCTCGGTTTGTCAATGATCGCCTATTTAAATATATCAAGAAGTTCACTGCAGAAAATCAGGGAATGTCGGCTGATGTTATCACAAAAGCATTTTTGGCAACGGAAGAAGAATTTCTCGCTCTGGTGAAGAAGCAGTGGCAACTCAAGCCACAGATAGCGTCCGTTGGAGCTTGCTGTTTGGTAGGCGTAATATATAACGGGGAGCTCTATACTGCAAATGCAGGAGATTCTCGAGCAGTGTTAGGTAGATTCGATGAGGCTACAAAAGAGATTAAAGCAGTTCAACTATCTTATGAGCATAATGCTAGCCTGGAATCTGTCAGAGAAGAGCTACGCTCATTACATCCCGATGATCCACAGATCGTAATGATGAAACACACGGTCTGGCGCGTGAAGGGTCTCATTCAGATTTCAAGATCCATTGGCGACGCTTATCTAAAGAAGAAAGAGTTTAACCAAGCACCACTGTTGTCAAAATTCCGGCTCTCGGAACCCTTTGAAACGCCAATCCTTAAAGCTGAACCAACAATACAAGTACAGAAACTAGAACCTAGTGATCAATTTCTTATATTTGCATCAGATGGATTATGGGAGCACATGAGCAATCAAGAAGCAGTTGACATTGTCCAAAGCGGTGCACGCAATGGAGTGGCGAAGAAACTTATCAAATCGGCGCTTTGTGAAGCTGCAAAGAAAAGAGAAATGAGATACTCAGACTTGAAAAAGATTGACCGTGGTGTACGGAGACATTTCCATGATGACATCACGGTGATAGTTGTGTATCTTGATTCGCATAACTCGCGAGCTCCCACCGTTTCAGTTAAAGGAGGTGGTGGTGATTTTGGTACTGGTATTGTAAATGGCTAG 1149 0.4413 MVSATIRRIVSPCWRPSSEGDSSRYGDGSGRSDGLLWYKDSGRHASGEFSMAVVQANNLLEDHSQVESGPMSLTEGSPHGTFVGVYDGHGGPETARFVNDRLFKYIKKFTAENQGMSADVITKAFLATEEEFLALVKKQWQLKPQIASVGACCLVGVIYNGELYTANAGDSRAVLGRFDEATKEIKAVQLSYEHNASLESVREELRSLHPDDPQIVMMKHTVWRVKGLIQISRSIGDAYLKKKEFNQAPLLSKFRLSEPFETPILKAEPTIQVQKLEPSDQFLIFASDGLWEHMSNQEAVDIVQSGARNGVAKKLIKSALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVYLDSHNSRAPTVSVKGGGGDFGTGIVNG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00234 382 Gene3D - 38 363 IPR036457 -
Vivi2g00234 382 SUPERFAMILY PP2C-like 58 358 IPR036457 -
Vivi2g00234 382 PANTHER PROTEIN PHOSPHATASE 38 355 IPR015655 GO:0004722|GO:0006470
Vivi2g00234 382 FunFam Phosphatase 2C family protein 37 365 - -
Vivi2g00234 382 Pfam Protein phosphatase 2C 70 326 IPR001932 -
Vivi2g00234 382 CDD PP2Cc 49 356 IPR001932 -
Vivi2g00234 382 SMART PP2C_4 40 354 IPR001932 -
Vivi2g00234 382 ProSitePatterns PPM-type phosphatase domain signature. 82 90 IPR000222 GO:0043169
Vivi2g00234 382 ProSiteProfiles PPM-type phosphatase domain profile. 45 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00234 Vivi-Chr2 7227130 7230276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00234 3 372 PP2C-type Phosphatase Gene Family AT3G12620 73.936 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00234 K01102 - gmx:100807559 611.298