Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00230 ATGAACATTCATCATCATATAGGAATCATGACTATATCATCATCTTTGCCAACAAATAATAAAAGCATTTTCTCAGTTTCAACAAGGCCACACTTTCTTGTTCCTTCTTCTTTTTCTCTTCCTTTCATTTCCACATCAACTTTCATCCATTTCCATAACCATCCACGTATTAATAAGCTCCACCTTCGACGACGACGGTTTAATTCTGTTACAAAATTGCCAACAACAATAGCCATGACAACAACTGAATGGGTTCAACAAGATCTTCCACCACCACTTACTTCAACTTCACCTCCACCTTCCTTATTTGATGGAACTACCAGATTGTATATCTCCTACAAATGTCCCTATGCACAGCGTGTATGGATCACCCGTAACACTAAGGGATTGCAGGACAAGATACAGTTAGTTCCCATTGATTTACAAGACAGACCTTCTTGGTATAAGGACAAACTCTACCCACCAAACAAGGTTCCATCTCTTGAACACAACAATGAAGTTAGAGGAGAGAGTCTTGATCTGATTAAATATATTGATACTCGCTTTGAAGGACCCTCCCTATTTCCTAATGATTCTCCTGATAAGGAATTTGCTGAAGAAATTCTATCTTACACAGATACCTTTTACAAGACAGTTGTTTCTTCTTTTAAAGGAGATGTAACTGAGGCTGGCACTGCTTTTGATCACATTGAGAATGTTCTCTCCAAGTATGATAATGGACCTTTCTTCCTTGGTCAATTCAGTTTGGTGGATATAGCATATGCACCTTTTATGGAAAGATTTCAACCTTTTCTAATGGATGTGAAAAACTATGACATTACATTGGGCAGGCCTAAACTGGCAGCATGGATTGAGGGGATAAACAACATTGAAGGCTACAAAATAACTCGTTCTGATCCCAAGGAGCTTATTGAAAGCTACAGGAAGCGCTTCGAGGCCAATCCATGA 948 0.3882 MNIHHHIGIMTISSSLPTNNKSIFSVSTRPHFLVPSSFSLPFISTSTFIHFHNHPRINKLHLRRRRFNSVTKLPTTIAMTTTEWVQQDLPPPLTSTSPPPSLFDGTTRLYISYKCPYAQRVWITRNTKGLQDKIQLVPIDLQDRPSWYKDKLYPPNKVPSLEHNNEVRGESLDLIKYIDTRFEGPSLFPNDSPDKEFAEEILSYTDTFYKTVVSSFKGDVTEAGTAFDHIENVLSKYDNGPFFLGQFSLVDIAYAPFMERFQPFLMDVKNYDITLGRPKLAAWIEGINNIEGYKITRSDPKELIESYRKRFEANP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00230 315 PANTHER GLUTATHIONE S-TRANSFERASE L1 83 312 IPR044629 GO:0004364
Vivi2g00230 315 CDD GST_C_Lambda 191 308 - -
Vivi2g00230 315 SUPERFAMILY GST C-terminal domain-like 182 312 IPR036282 -
Vivi2g00230 315 SUPERFAMILY Thioredoxin-like 99 187 IPR036249 -
Vivi2g00230 315 Gene3D - 184 314 - -
Vivi2g00230 315 Pfam Glutathione S-transferase, C-terminal domain 220 285 - -
Vivi2g00230 315 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 105 186 IPR004045 -
Vivi2g00230 315 FunFam Glutathione S-transferase L2, chloroplastic 80 183 - -
Vivi2g00230 315 Gene3D Glutaredoxin 80 183 - -
Vivi2g00230 315 FunFam Lambda class glutathione S-transferase 184 314 - -
Vivi2g00230 315 Pfam Glutathione S-transferase, N-terminal domain 109 185 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00230 Vivi-Chr2 7220626 7222877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00230 87 311 Glutathione S-transferase Gene Family AT5G02790 62.832 6.83e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00230 K00799 - ming:122093307 363.999