Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00209 ATGGTATCGGCTACAATTAGGCGTATCGTGTCACCTTGTTGGAGGCCATCTAGTGAGGGCGATTCTAGTAGGTATGGCGATGGGAGTGGACGTTCTGATGGTTTGTTGTGGTATAAAGATTCTGGAAGACATGCAAGCGGTGAATTCTCAATGGCGGTTGTTCAAGCAAACAATTTGTTGGAGGATCATAGCCAAGTCGAATCAGGACCCATGAGCTTAACTGAAGGAAGTCCTCATGGTACTTTTGTTGGTGTTTATGATGGCCATGGAGGTCCGGAAACTGCTCGGTTTGTCAATGATCGCCTATTTAAATATATCAAGAAAAATCAGGGAATGTCAGCTGATGTTATCACAAAAGCATTTTTGGCAACGGAAGAAGAATTTCTCGCTCTGGTGAAGAAGCAGTGGCAACTCAAGCCACAGATAGCGTCCGTTGGAGCTTGCTGTTTGGTAGGCGTAATATATAACGGGGAGCTCTATACTGCAAATGCAGGAGATTCTCGAGCAGTGTTAGGTAGATTCGATGAGGCTACAAAAGAGATTAAAGCAGTTCAACTATCATATGAGCATAATGCTAGCCTGGAATCTGTCAGAGAAGAGCTACGCTCATTGCATCCCGATGATCCACAGATCGTAATGATGAAGCACACGGTCTGGCGCGTGAAGGGTCTCATTCAGATTTCAAGATCCATTGGCGACGCTTATCTAAAGAAGAAAGAGTTTAACCAAGCACCACTGTTGTCAAAATTCCGGCTCTCGGAACCCTTTGAAACGCCAATCCTTAAAGCTGAACCAACAATACAAGTACAGAAACTAGAACCTAGTGATCAATTTCTTATATTTGCATCAGATGGATTATGGGAGCACATGAGCAATCAAGAAGCAGTTGACATTGTCCAAAGCGGTGCACGCAGTGGAGTGGCGAAGAAACTTATCAAATCGGCGCTTTGTGAAGCTGCAAAGAAAAGAGAAATGAGATACTCAGACTTGAAAAAGATTGACCGTGGTGTACGGAGACATTTCCATGATGACATCACGGTGATAGTTGTGTATCTTGATTCGCATAACTCTCGAGCTCCCACCGTTTCAGTTAAAGGAGGTGGTGGTGATTTTGGTACTGGTATTGTAAATGGCTAG 1137 0.4406 MVSATIRRIVSPCWRPSSEGDSSRYGDGSGRSDGLLWYKDSGRHASGEFSMAVVQANNLLEDHSQVESGPMSLTEGSPHGTFVGVYDGHGGPETARFVNDRLFKYIKKNQGMSADVITKAFLATEEEFLALVKKQWQLKPQIASVGACCLVGVIYNGELYTANAGDSRAVLGRFDEATKEIKAVQLSYEHNASLESVREELRSLHPDDPQIVMMKHTVWRVKGLIQISRSIGDAYLKKKEFNQAPLLSKFRLSEPFETPILKAEPTIQVQKLEPSDQFLIFASDGLWEHMSNQEAVDIVQSGARSGVAKKLIKSALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVYLDSHNSRAPTVSVKGGGGDFGTGIVNG 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00209 378 ProSiteProfiles PPM-type phosphatase domain profile. 45 352 IPR001932 -
Vivi2g00209 378 Pfam Protein phosphatase 2C 70 323 IPR001932 -
Vivi2g00209 378 FunFam Phosphatase 2C family protein 37 361 - -
Vivi2g00209 378 PANTHER PROTEIN PHOSPHATASE 38 351 IPR015655 GO:0004722|GO:0006470
Vivi2g00209 378 Gene3D - 38 359 IPR036457 -
Vivi2g00209 378 SMART PP2C_4 40 350 IPR001932 -
Vivi2g00209 378 CDD PP2Cc 49 352 IPR001932 -
Vivi2g00209 378 ProSitePatterns PPM-type phosphatase domain signature. 82 90 IPR000222 GO:0043169
Vivi2g00209 378 SUPERFAMILY PP2C-like 58 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00209 Vivi-Chr2 6873933 6877093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00209 3 368 PP2C-type Phosphatase Gene Family AT3G12620 72.872 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00209 K01102 - gmx:100807559 597.045