Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g00205 | ATGCCTCAGCTTCGTAGCGGAGTGCGACGTGCTCGTGCAGCGCCGGTAACCGAAAAGGAATCGGAGCCGCCACCTAAGCCGGCGCCGAGGGGGAGGGGTAGACCCAGAACTAGATTGGCCGCCAAGAAATCTGAGCCGCCGTTGACACCGTTATTGGTTCCTGAAAGTTTGAAGAAGGCGGTGGTTGAGGAGGAAGGTGTGGGTGTCATGGGTGATGAAAGAGTTGGTGTCAGTGCTAATAAGGATAAGGGTGTTGCTGCTGTTCCAGAAGAAGATGCCAACTCTCCACCTCTTCCAGAAAGGGTTCAAGTAGGAGGATCGCCTCTCTATAAGGTAGAAAGGAAACTTGGTAAAGGTGGATTTGGCCAGGTTTTTGTTGGCCGTCGCGAGCGTGCTAATGCTCCTGGAGCTGTGGAGGTGGCTCTGAAATTTGAACATAGAAACAGTAAAGGTTGCAGCTATGGCCCTCCTTATGAGTGGCAAGTATACAACACACTTGGTGGTAGTCATGGAATACCTAAAGTACACTATAAAGGAAGACAAGGAGAATATTATGTGATGGTCATGGACATTCTTGGTCCAAGTTTGTGGGATGTATGGAATACCTCAGGCCAATCGATGTCTCCTGAGATGGTCTCATGTATAGCTGTTGAGTCATTATCAATACTTGAGAAGTTGCACGCAAAAGGTTATGTACACGGAGATGTAAAACCAGAGAACTTTTTACTAGGTCAGCCCAACACAGCACAGGAGAAGAAATTGTTTCTTGTTGACCTTGGTTTAGCAACAAAATGGAAAGATTCGTCGAGTGGAAAGCATACTGAATATGATCAACGCCCCGACATGTTTAGAGGGACTGTTCGATACGCAAGTGTTCATGCTCATCTGGGAAGAACTGCCAGTAGAAGGGATGATCTTGAATCACTTGCATACACACTAATCTTCCTTCATAGGGGCCGATTGCCATGGCAAGGTTTCCAGGGTGATGGTAAATCCTTCCTCGTTTGCAAAAAGAAAATGGGAACATCTGCTGAGATGTTGTGCTGCTTTTGCCCTGCTCCTTTTAAACTATTTCTCGAGACTGTGGTGAACATGAAGTTTGATGAAGAACCCAACTATTCCAAGCTAATATCCTTGTTTGATGGTATACTCGGACCTAATCCCGCATTACGACCAATTAATACCGAAGGCGCACAAAAGGTTGGGCAAAAGCGGGGTAGATTAACTGCTGATGCAGATGACGAACAGCCCAAAAAGAAGGTTCGTTCAGGGATTCCTGCTTCCCAATGGATTTCAGTTTACAATGCTAGACAACCAATGAAACAAAGGTATCATTACAATGTGGCTGATGGAAGATTAGCACAGCATATTGAGAGGGGGATTGCAGATGACCTTCTTATCAGTTGTGTATCATGTTGTTCCAATCTATGGGCACTTATCATGGATGCTGGAACTAATTATACCGGACAAGTTTACAAGTTATCACCGTTGTTTCTACACAAGGAATGGATCTTAGAACAATGGGATAAGAACTTCTACATTACTTCTATTGCAGGGGCCAATAATGGCAGCTCTGTTGTGGTGATGTCTAAAGGTACGAGGTATACTCAACAATCGTACAAAGTAAGCGAATCTTTCCCCTACAAGTGGATAAACAAGAAGTGGAAAGAAGGTTTTCATGTCACCTCAATGGGTACTGCTGGAAACCGCTGGGGTATTGTTATGTCTCGCAATGCTGGATTCAGTGAACAGGTGGTGGAACTGGATTTCCTCTATCCAAGTGAAGGAATCCATAAACGTTGGGATAATGGTTTTAGGATTACAGCAACTGCGGCCACATTGGATCAATCTGCGCTTATATTAAGTATCCCGAGGAACAGGCCCGGTGATGAAACTCAGGAAACTCTGCGCACATCTCAATTTCCCAGTGCTCATGTAAAGGAAAAATGGGCAAAAAACCTTTATCTTGCCCATTTGTGCTATGGGCGCACAGTATGCTGA | 2001 | 0.4518 | MPQLRSGVRRARAAPVTEKESEPPPKPAPRGRGRPRTRLAAKKSEPPLTPLLVPESLKKAVVEEEGVGVMGDERVGVSANKDKGVAAVPEEDANSPPLPERVQVGGSPLYKVERKLGKGGFGQVFVGRRERANAPGAVEVALKFEHRNSKGCSYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDILGPSLWDVWNTSGQSMSPEMVSCIAVESLSILEKLHAKGYVHGDVKPENFLLGQPNTAQEKKLFLVDLGLATKWKDSSSGKHTEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHRGRLPWQGFQGDGKSFLVCKKKMGTSAEMLCCFCPAPFKLFLETVVNMKFDEEPNYSKLISLFDGILGPNPALRPINTEGAQKVGQKRGRLTADADDEQPKKKVRSGIPASQWISVYNARQPMKQRYHYNVADGRLAQHIERGIADDLLISCVSCCSNLWALIMDAGTNYTGQVYKLSPLFLHKEWILEQWDKNFYITSIAGANNGSSVVVMSKGTRYTQQSYKVSESFPYKWINKKWKEGFHVTSMGTAGNRWGIVMSRNAGFSEQVVELDFLYPSEGIHKRWDNGFRITATAATLDQSALILSIPRNRPGDETQETLRTSQFPSAHVKEKWAKNLYLAHLCYGRTVC | 666 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g00205 | 666 | SUPERFAMILY | Protein kinase-like (PK-like) | 110 | 389 | IPR011009 | - | |
Vivi2g00205 | 666 | CDD | STKc_CK1 | 110 | 380 | - | - | |
Vivi2g00205 | 666 | FunFam | casein kinase 1-like protein HD16 | 81 | 422 | - | - | |
Vivi2g00205 | 666 | ProSiteProfiles | Protein kinase domain profile. | 110 | 390 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g00205 | 666 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 231 | 243 | IPR008271 | GO:0004672|GO:0006468 | |
Vivi2g00205 | 666 | Gene3D | Transferase(Phosphotransferase) domain 1 | 80 | 427 | - | - | |
Vivi2g00205 | 666 | PANTHER | CASEIN KINASE-RELATED | 110 | 628 | - | - | |
Vivi2g00205 | 666 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Vivi2g00205 | 666 | Pfam | Protein kinase domain | 110 | 393 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g00205 | 666 | MobiDBLite | consensus disorder prediction | 12 | 29 | - | - | |
Vivi2g00205 | 666 | ProSitePatterns | Protein kinases ATP-binding region signature. | 116 | 143 | IPR017441 | GO:0005524 | |
Vivi2g00205 | 666 | SMART | serkin_6 | 110 | 399 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g00205 | Vivi-Chr2 | 6823090 | 6828192 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g00205 | 104 | 338 | AGC Kinase Gene Family | AT3G08730 | 22.363 | 3.52e-07 | 51.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1-Pl | Vivi2g00205 | Pkinase | 3e-19 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g00205 | - | - | vvo:131648961 | 1321.22 |