Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00205 ATGCCTCAGCTTCGTAGCGGAGTGCGACGTGCTCGTGCAGCGCCGGTAACCGAAAAGGAATCGGAGCCGCCACCTAAGCCGGCGCCGAGGGGGAGGGGTAGACCCAGAACTAGATTGGCCGCCAAGAAATCTGAGCCGCCGTTGACACCGTTATTGGTTCCTGAAAGTTTGAAGAAGGCGGTGGTTGAGGAGGAAGGTGTGGGTGTCATGGGTGATGAAAGAGTTGGTGTCAGTGCTAATAAGGATAAGGGTGTTGCTGCTGTTCCAGAAGAAGATGCCAACTCTCCACCTCTTCCAGAAAGGGTTCAAGTAGGAGGATCGCCTCTCTATAAGGTAGAAAGGAAACTTGGTAAAGGTGGATTTGGCCAGGTTTTTGTTGGCCGTCGCGAGCGTGCTAATGCTCCTGGAGCTGTGGAGGTGGCTCTGAAATTTGAACATAGAAACAGTAAAGGTTGCAGCTATGGCCCTCCTTATGAGTGGCAAGTATACAACACACTTGGTGGTAGTCATGGAATACCTAAAGTACACTATAAAGGAAGACAAGGAGAATATTATGTGATGGTCATGGACATTCTTGGTCCAAGTTTGTGGGATGTATGGAATACCTCAGGCCAATCGATGTCTCCTGAGATGGTCTCATGTATAGCTGTTGAGTCATTATCAATACTTGAGAAGTTGCACGCAAAAGGTTATGTACACGGAGATGTAAAACCAGAGAACTTTTTACTAGGTCAGCCCAACACAGCACAGGAGAAGAAATTGTTTCTTGTTGACCTTGGTTTAGCAACAAAATGGAAAGATTCGTCGAGTGGAAAGCATACTGAATATGATCAACGCCCCGACATGTTTAGAGGGACTGTTCGATACGCAAGTGTTCATGCTCATCTGGGAAGAACTGCCAGTAGAAGGGATGATCTTGAATCACTTGCATACACACTAATCTTCCTTCATAGGGGCCGATTGCCATGGCAAGGTTTCCAGGGTGATGGTAAATCCTTCCTCGTTTGCAAAAAGAAAATGGGAACATCTGCTGAGATGTTGTGCTGCTTTTGCCCTGCTCCTTTTAAACTATTTCTCGAGACTGTGGTGAACATGAAGTTTGATGAAGAACCCAACTATTCCAAGCTAATATCCTTGTTTGATGGTATACTCGGACCTAATCCCGCATTACGACCAATTAATACCGAAGGCGCACAAAAGGTTGGGCAAAAGCGGGGTAGATTAACTGCTGATGCAGATGACGAACAGCCCAAAAAGAAGGTTCGTTCAGGGATTCCTGCTTCCCAATGGATTTCAGTTTACAATGCTAGACAACCAATGAAACAAAGGTATCATTACAATGTGGCTGATGGAAGATTAGCACAGCATATTGAGAGGGGGATTGCAGATGACCTTCTTATCAGTTGTGTATCATGTTGTTCCAATCTATGGGCACTTATCATGGATGCTGGAACTAATTATACCGGACAAGTTTACAAGTTATCACCGTTGTTTCTACACAAGGAATGGATCTTAGAACAATGGGATAAGAACTTCTACATTACTTCTATTGCAGGGGCCAATAATGGCAGCTCTGTTGTGGTGATGTCTAAAGGTACGAGGTATACTCAACAATCGTACAAAGTAAGCGAATCTTTCCCCTACAAGTGGATAAACAAGAAGTGGAAAGAAGGTTTTCATGTCACCTCAATGGGTACTGCTGGAAACCGCTGGGGTATTGTTATGTCTCGCAATGCTGGATTCAGTGAACAGGTGGTGGAACTGGATTTCCTCTATCCAAGTGAAGGAATCCATAAACGTTGGGATAATGGTTTTAGGATTACAGCAACTGCGGCCACATTGGATCAATCTGCGCTTATATTAAGTATCCCGAGGAACAGGCCCGGTGATGAAACTCAGGAAACTCTGCGCACATCTCAATTTCCCAGTGCTCATGTAAAGGAAAAATGGGCAAAAAACCTTTATCTTGCCCATTTGTGCTATGGGCGCACAGTATGCTGA 2001 0.4518 MPQLRSGVRRARAAPVTEKESEPPPKPAPRGRGRPRTRLAAKKSEPPLTPLLVPESLKKAVVEEEGVGVMGDERVGVSANKDKGVAAVPEEDANSPPLPERVQVGGSPLYKVERKLGKGGFGQVFVGRRERANAPGAVEVALKFEHRNSKGCSYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDILGPSLWDVWNTSGQSMSPEMVSCIAVESLSILEKLHAKGYVHGDVKPENFLLGQPNTAQEKKLFLVDLGLATKWKDSSSGKHTEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHRGRLPWQGFQGDGKSFLVCKKKMGTSAEMLCCFCPAPFKLFLETVVNMKFDEEPNYSKLISLFDGILGPNPALRPINTEGAQKVGQKRGRLTADADDEQPKKKVRSGIPASQWISVYNARQPMKQRYHYNVADGRLAQHIERGIADDLLISCVSCCSNLWALIMDAGTNYTGQVYKLSPLFLHKEWILEQWDKNFYITSIAGANNGSSVVVMSKGTRYTQQSYKVSESFPYKWINKKWKEGFHVTSMGTAGNRWGIVMSRNAGFSEQVVELDFLYPSEGIHKRWDNGFRITATAATLDQSALILSIPRNRPGDETQETLRTSQFPSAHVKEKWAKNLYLAHLCYGRTVC 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00205 666 SUPERFAMILY Protein kinase-like (PK-like) 110 389 IPR011009 -
Vivi2g00205 666 CDD STKc_CK1 110 380 - -
Vivi2g00205 666 FunFam casein kinase 1-like protein HD16 81 422 - -
Vivi2g00205 666 ProSiteProfiles Protein kinase domain profile. 110 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00205 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Vivi2g00205 666 Gene3D Transferase(Phosphotransferase) domain 1 80 427 - -
Vivi2g00205 666 PANTHER CASEIN KINASE-RELATED 110 628 - -
Vivi2g00205 666 MobiDBLite consensus disorder prediction 1 51 - -
Vivi2g00205 666 Pfam Protein kinase domain 110 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00205 666 MobiDBLite consensus disorder prediction 12 29 - -
Vivi2g00205 666 ProSitePatterns Protein kinases ATP-binding region signature. 116 143 IPR017441 GO:0005524
Vivi2g00205 666 SMART serkin_6 110 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00205 Vivi-Chr2 6823090 6828192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00205 104 338 AGC Kinase Gene Family AT3G08730 22.363 3.52e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Vivi2g00205 Pkinase 3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00205 - - vvo:131648961 1321.22