Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00153 ATGGAGAAATTGTGGAGCTTTTCCTCAAGATCCAATAGTAATATTGTTGGAACCGATAAGCTAGAATGGGAAGAAGAAGAAGAAGAAGAGAACAATCTACTTGAGCAGTTAGATGATAAAATCCATCTTTCACAAGTTTTAGAAGATGTGGATTATTTTCTCAATAGCGTAACAACTCCTAATTCTAGTTCTACAGATGAAGTTCCCAATTGTGTTGTCTTATTGCATAAATTATTGGAGTCTATGATAGATAAGTATAATAAACCATCAAGAGGAACAAGAATTAAATTTGGGCGAGATCCAGAGATTTATAAGTCTTTTTTAGATGCGGTGGAACGCATCTTCAAGCTCTCTATCACCTCGAGTTTGGGTGACCTCTATTTAGATAGAACAAGCTCTATCCTAGAAAAAGCCATGTTTATTTTAGAGAATGACATTTGTGCTCTGCTACAACGCCCCAAATCCAAAATATACCGATCAACACCAACACCAACAACTAAGAAATCTGCTTCCTTTGGTTCCCTTCAACTACATTTTCAACTTCAAGATGAGAGGGATTCCCTAAGGCTTAACAATCAAGATGATGATGATGACGACGACGATGGTGACTTATTGCCAAATTTCTCTTTACAAGAACTTTCCATTATGAATAATATTACCACTTCCATGATTGCTGCAGGATATCATTTAGAGTGTTGCATGGCCATTACCGCTTTCAGGAGAAATTCTTTCAAAAATGTGTTGCGAAAATTAGGATACACATTTCTAAGGATGGATGAGGTTTATAAAATGCAATGGGACTTATTGGAAGGAGAAATTGTGACATGGAACAAAGTGTTTCGGCATTGCACCAATGTACTCTTCAAAGCCGAACGAAAGTTATACGATTCAATATTCTCAAACCAACCCTCTTTATCTCGGACCATGTTTGGTGATCTTGTTCGACTTGTCATCATCCATTTTTTGAATTTTGCTCAAGCAGTGGTTTTAACCAAGCCATCACCAGAGAAATTATTCAAATTCCTAGACATGTATGAGACCTTGAGAGATGAATTAGATCCTATCATTGTACTCATGAATGATGATGGTTTAGAGCGATGTGCTAAGGATTTGACACACGAGGCATCTGAAACAAAACATGGGATCATAAAGGTTGTTGTGGAAATGTTCTATGATTTGGAAAACTCCATTAAGGGTGATAATCATAGGATTCCCGTCCCATATGGTGCCATTCATCCATTGACTCGTTATGTCATGAATTATCTTAAATATGCATGTGAATACAAAGTGACGTTGGAGCAGGTATTTTTCCAATATTCTACGGATCAATTTATTTCTACTACTGATCATTATCATTATGTTGATGATCATAATAAGGGTACATCCACGACCTCAAAAAATATTCCAGAATTGGACAAGACACTGGAGAAATCACCTTTTGTGGTTCAACTAATGAGAATAATGGACCTTTTAGATGAAAATACTGAAAACAAGTCCAAATTATATAAGGATATGGCTTTGCGTTGTGTATTTCTAATGAACAATGGGAGATACATAGTGCAAAAGATCAAAGGGTGTGCTGATCTTCACGAGTCCATGGTAGATGATTGGTGTAGGAGAAAGCAAACAAGTTTGAAGATGCACCATAAGAGTTATCAAAGAGAGACTTGGAGTAACGTGTTGCAATGCCTCAAGTTGGATGGGCTTCACCAACAAGGAAACAAGGTGTCTAAGCAGGTTTTGAGAGATAAGTTTAAGTGCTTTAATTCTTTGTTTGAAGAGATACACAAGACACAAAGCAGTTGGATGGTGAGTGATGAACAACTTCAATCCGAATTGAGGGTTTCAATATCTGCTTTGGTTATACCCGCATATCGCTCCTTTATGGGAAGATTTAAACATTATTTAGAATCTGGTAGACATGTTGATAAGTACATTAAATATCATCCTGACGACATAGAAATTTTGATTGATGATTTTTTTGTAGGAAATGCCACATCCATGCCTCGAAGGAAGATATGA 2022 0.3665 MEKLWSFSSRSNSNIVGTDKLEWEEEEEEENNLLEQLDDKIHLSQVLEDVDYFLNSVTTPNSSSTDEVPNCVVLLHKLLESMIDKYNKPSRGTRIKFGRDPEIYKSFLDAVERIFKLSITSSLGDLYLDRTSSILEKAMFILENDICALLQRPKSKIYRSTPTPTTKKSASFGSLQLHFQLQDERDSLRLNNQDDDDDDDDGDLLPNFSLQELSIMNNITTSMIAAGYHLECCMAITAFRRNSFKNVLRKLGYTFLRMDEVYKMQWDLLEGEIVTWNKVFRHCTNVLFKAERKLYDSIFSNQPSLSRTMFGDLVRLVIIHFLNFAQAVVLTKPSPEKLFKFLDMYETLRDELDPIIVLMNDDGLERCAKDLTHEASETKHGIIKVVVEMFYDLENSIKGDNHRIPVPYGAIHPLTRYVMNYLKYACEYKVTLEQVFFQYSTDQFISTTDHYHYVDDHNKGTSTTSKNIPELDKTLEKSPFVVQLMRIMDLLDENTENKSKLYKDMALRCVFLMNNGRYIVQKIKGCADLHESMVDDWCRRKQTSLKMHHKSYQRETWSNVLQCLKLDGLHQQGNKVSKQVLRDKFKCFNSLFEEIHKTQSSWMVSDEQLQSELRVSISALVIPAYRSFMGRFKHYLESGRHVDKYIKYHPDDIEILIDDFFVGNATSMPRRKI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00153 673 Pfam Exo70 exocyst complex subunit 276 658 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi2g00153 673 Gene3D Exocyst complex component Exo70 80 671 - -
Vivi2g00153 673 SUPERFAMILY Cullin repeat-like 94 661 IPR016159 -
Vivi2g00153 673 Coils Coil 20 40 - -
Vivi2g00153 673 PANTHER EXOCYST COMPLEX PROTEIN EXO70 80 662 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00153 Vivi-Chr2 5326318 5328561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00153 43 672 EXO70 exocyst subunit family AT5G13150 42.567 2.11e-165 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00153 K07195 - mtr:25485763 968.763