Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00148 ATGGGTTGTTTTTCGTGTTTCGATTCAAAGGAAGATGAGAAGCTGAATCCTCAAGAATCATCACACAAGAACGATCATCACGATCATAATCTCCCTTCTGCCGCCTCTGGAGCAGAGAAGGTTCGGTCAACAAGTAATGGAGGAGGAGCATCCAAAAGGGAATTTCCTTCTCTTCTCAAAGACGGGCCACCCGGTCAAATTGCTGCTCAAACCTTTACTTTCCGTGAACTCGCCCTTGCAACTAAAAACTTCAGGCCTCAATCCTTTTTAGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGACGACTCGAATCCACTTCTCAGGCTGTTGCTGTTAAACAGTTAGACAAAGATGGTCTCCAGGGTAATCGCGAGTTCCTTGTGGAAGTTCTCATGCTCAGTCTTCTACACCATCCTAACCTTGTCAGTCTCATTGGTTACTGCGCCGATGGGGACCAACGCCTATTAGTGTATGAATTTATGCCCCTCGGATCATTGGAAGATCACCTTCACGATCTCCCCCCTGATAAGGAGCCTTTAGATTGGAACACTAGAATGAAAATAGCCGCTGGTGCCGCAAAAGGATTGGAATACCTACATGACAAGGCAAATCCTCCAGTAATTTATAGGGACTTCAAGTCATCTAATATTTTACTTGAGGAAGGTTATCATCCAAAGCTTTCTGACTTTGGTCTGGCAAAGCTTGGTCCTGTTGGGGACAAATCACATGTTTCCACTCGTGTCATGGGTACTTATGGTTACTGTGCTCCCGAGTATGCTATGACTGGACAGCTGACTGTAAAATCCGACGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATAGACAGCACCCGGCCCCACGGAGAACAAAACCTCGTCACATGGGCACGGCCTTTATTCAATGACCGTAGGAAGTTTCCAAAGCTGGCAGATCCACGGTTGCAGGGACGGTATCCCATGCGGGGTCTTTATCAAGCTCTAGCTGTAGCATCAATGTGCATTCAAGAACAGGCAGCTGCACGTCCTCTGATCGGGGATGTGGTGACAGCCCTTTCTTATCTAGCCAACCAGGCATATGATACTAACAATCCTGGAATTGGTAATAATAAGGGAACTGGAAATAGAGATGATAAAGGTGGAAGAATATTAAAAAACGATGAAGGTGAAGGATCCGGGCGTAGATGGGATTTGGAGGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCTAAGATGTTAAACCGGGATCTTGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTGAGAGATAAAAGACGACAGAGTGTGCAAGGCAGTTTTGATGCTTCTAATGCCTAG 1374 0.4651 MGCFSCFDSKEDEKLNPQESSHKNDHHDHNLPSAASGAEKVRSTSNGGGASKREFPSLLKDGPPGQIAAQTFTFRELALATKNFRPQSFLGEGGFGRVYKGRLESTSQAVAVKQLDKDGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAYDTNNPGIGNNKGTGNRDDKGGRILKNDEGEGSGRRWDLEGSEKDDSPRETAKMLNRDLDRERAVAEAKMWGENLRDKRRQSVQGSFDASNA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00148 457 Gene3D Phosphorylase Kinase; domain 1 68 160 - -
Vivi2g00148 457 Gene3D Transferase(Phosphotransferase) domain 1 161 377 - -
Vivi2g00148 457 PANTHER OS07G0668900 PROTEIN 3 370 - -
Vivi2g00148 457 MobiDBLite consensus disorder prediction 366 425 - -
Vivi2g00148 457 FunFam Serine/threonine-protein kinase PBS1 58 160 - -
Vivi2g00148 457 Pfam Protein kinase domain 87 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00148 457 MobiDBLite consensus disorder prediction 37 51 - -
Vivi2g00148 457 SUPERFAMILY Protein kinase-like (PK-like) 69 356 IPR011009 -
Vivi2g00148 457 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00148 457 MobiDBLite consensus disorder prediction 1 64 - -
Vivi2g00148 457 MobiDBLite consensus disorder prediction 381 425 - -
Vivi2g00148 457 MobiDBLite consensus disorder prediction 7 33 - -
Vivi2g00148 457 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Vivi2g00148 457 FunFam Serine/threonine-protein kinase PBS1 161 376 - -
Vivi2g00148 457 CDD STKc_IRAK 90 358 - -
Vivi2g00148 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00148 Vivi-Chr2 5184380 5188240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00148 1 445 Glycoside Hydrolase AT3G07070 55.361 4.25e-166 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vivi2g00148 Pkinase 7.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00148 K13430 - mnt:21400483 770