Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00147 ATGGGTTGTTTTTCGTGTTTCGATTCAAAGGAAGATGAGAAGCTGAATCCTCAAGAATCATCACACAAGAACGATCATCACGATCATAATCTCCCTTCTGCCGCCTCTGGAGGAGCAGAGAAGGTTCGGTCAACAAGTAATGGAGGAGGAGCATCCAAAAGGGAATTTCCTTCTCTTCTCAAAGACGGGCCACCCGGTCAAATTGCTGCTCAAACCTTTACTTTCCGTGAACTCGCCCTTGCAACTAAAAACTTCAGGCCTCAATCCTTTTTAGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGACGACTCGAATCCACTTCTCAGGCTGTTGCTGTTAAACAGTTAGACAAAGATGGTCTCCAGGGTAATCGCGAGTTCCTTGTGGAAGTTCTCATGCTCAGTCTTCTACACCATCCTAACCTTGTCAGTCTCATTGGTTACTGCGCCGATGGGGACCAACGCCTATTAGTGTATGAATTTATGCCCCTCGGATCATTGGAAGATCACCTTCACGATCTCCCCCCTGATAAGGAGCCTTTAGATTGGAACACTAGAATGAAAATAGCCGCTGGTGCCGCAAAAGGATTGGAATACCTACATGACAAGGCAAATCCTCCAGTAATTTATAGGGACTTCAAGTCATCTAATATTTTACTTGAGGAAGGTTATCATCCAAAGCTTTCTGACTTTGGTCTGGCAAAGCTTGGTCCTGTTGGGGACAAATCACATGTTTCCACTCGTGTCATGGGTACTTATGGTTACTGTGCTCCCGAGTATGCTATGACTGGACAGCTGACTGTAAAATCCGACGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATAGACAGCACCCGGCCCCACGGAGAACAAAACCTCGTCACATGGGCACGGCCTTTATTCAATGACCGTAGGAAGTTTCCAAAGCTGGCAGATCCACGGTTGCAGGGACGGTATCCCATGCGGGGTCTTTATCAAGCTCTAGCTGTAGCATCAATGTGCATTCAAGAACAGGCAGCTGCACGTCCTCTGATCGGGGATGTGGTGACAGCCCTTTCTTATCTAGCCAACCAGGCATATGATACTAACAATCCTGGAATTGGTAATAATAAGGGAACTGGAAATAGAGATGATAAAGGTGGAAGAATATTAAAAAACGATGAAGGTGAAGGATCCGGGCGTAGATGGGATTTGGAGGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCTAAGATGTTAAACCGGGATCTTGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTGAGAGATAAAAGACGACAGAGTGTGCAAGGCAGTTTTGATGCTTCTAATGCCTAG 1377 0.4655 MGCFSCFDSKEDEKLNPQESSHKNDHHDHNLPSAASGGAEKVRSTSNGGGASKREFPSLLKDGPPGQIAAQTFTFRELALATKNFRPQSFLGEGGFGRVYKGRLESTSQAVAVKQLDKDGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAYDTNNPGIGNNKGTGNRDDKGGRILKNDEGEGSGRRWDLEGSEKDDSPRETAKMLNRDLDRERAVAEAKMWGENLRDKRRQSVQGSFDASNA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00147 458 Gene3D Transferase(Phosphotransferase) domain 1 162 378 - -
Vivi2g00147 458 MobiDBLite consensus disorder prediction 382 426 - -
Vivi2g00147 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Vivi2g00147 458 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Vivi2g00147 458 Pfam Protein kinase domain 88 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00147 458 MobiDBLite consensus disorder prediction 367 426 - -
Vivi2g00147 458 PANTHER OS07G0668900 PROTEIN 3 371 - -
Vivi2g00147 458 MobiDBLite consensus disorder prediction 7 30 - -
Vivi2g00147 458 Gene3D Phosphorylase Kinase; domain 1 69 161 - -
Vivi2g00147 458 FunFam Serine/threonine-protein kinase PBS1 59 161 - -
Vivi2g00147 458 FunFam Serine/threonine-protein kinase PBS1 162 377 - -
Vivi2g00147 458 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00147 458 CDD STKc_IRAK 91 359 - -
Vivi2g00147 458 SUPERFAMILY Protein kinase-like (PK-like) 70 357 IPR011009 -
Vivi2g00147 458 MobiDBLite consensus disorder prediction 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00147 Vivi-Chr2 5184380 5188242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00147 1 446 Glycoside Hydrolase AT3G07070 55.240 6.05e-166 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vivi2g00147 Pkinase 7.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00147 K13430 - gmx:100777987 769.615