Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00073 ATGTCTCGCAAAGGCAAAAACACCGTCGAAGAAGAACAAGTATTGCAGCGCGTGAAGAGAGAGCGCGTCAATGCCAACGACAACGACAACGACAACTCCACGGCGGAGCAAAACTCCTCAATCCGCCGTATCATCCGCTCCGAGTTTCTCAAACTCAAGTCTCTCATCAACGAGAAGAAAGATGATTTGCTTGACGCCGATTCGGACAAATTCGATTCGATTCTGAGCGAGTTTGACAAGTTACATGATCAAGTTAAGAGGCCTCGAGAACAGGTTGCAGACGCTGAGGCGCTGCTCGATCTCACTCGCAGTTTGGTTGGATCTGTGAAGTCTATGGTGAACGAAGGTGTTACTCCTTCTCAGTTTGTTTCTTCGTTGATTCAACGATATGCTCCTTCGCCTAATAGCTCCGTTGATTGGCGAAAACTCGGAAGTTCGGTTTCCCACATTTTTCTCACAGTTCATGGATCTTCCACCATGCTTGGTCCCATGGAAAATCAGTTGAAACAGCGCAAGACAGTAGTGACTAGAAAGCGAGGGCCTCGTTCTGCTACAACTGATAGGCCTGAACAGCTGAATGATGCTGTTGAAGGGGAAAAAACTGATACTGACAAAAACATGTCAACCATGTTTAACATATTGAGGGAAAATAAAAAGGTGCAGCTTGAACACTTAATTTTGAATAGATTTTCGTTTGCTCAGACAGTGGAGAATTTGTTTGCCCTGTCATTCTTAGTGAAAGATGGTCGTGCTGAGATCAATATGGACAAAAACCATTCACACTATGTTTCGCCAAAAAATGCTCCGGCTGCCAATGCTGTAATGTCAAAAGAAGTTTCTTATACTCATTTCGTCTTCAGATATGATTACAATGACTGGAAGATAATGAAGGATCTTGTGCCAGATGGTAAAGAGCTAATGCCACATAGGACTCAACACAGCACTGTGGATGGCTCAAAGTCAGAAATGGATGGTGACAATTCTGCACAAGCTTTGCCTGTTACTCCTATTAGGAAGATATCCCGTAACCGAGGGCGGGTTTTGCAGGAGGAAAGTGTCGTTGAAGAATCTCCTGAATGTGACGATGAAGATGCTTCTAGAGAGGCTGCAATCCGAAGGTGTAAGCGGAAACTCCATTAA 1140 0.4447 MSRKGKNTVEEEQVLQRVKRERVNANDNDNDNSTAEQNSSIRRIIRSEFLKLKSLINEKKDDLLDADSDKFDSILSEFDKLHDQVKRPREQVADAEALLDLTRSLVGSVKSMVNEGVTPSQFVSSLIQRYAPSPNSSVDWRKLGSSVSHIFLTVHGSSTMLGPMENQLKQRKTVVTRKRGPRSATTDRPEQLNDAVEGEKTDTDKNMSTMFNILRENKKVQLEHLILNRFSFAQTVENLFALSFLVKDGRAEINMDKNHSHYVSPKNAPAANAVMSKEVSYTHFVFRYDYNDWKIMKDLVPDGKELMPHRTQHSTVDGSKSEMDGDNSAQALPVTPIRKISRNRGRVLQEESVVEESPECDDEDASREAAIRRCKRKLH 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00073 379 MobiDBLite consensus disorder prediction 174 199 - -
Vivi2g00073 379 MobiDBLite consensus disorder prediction 305 320 - -
Vivi2g00073 379 MobiDBLite consensus disorder prediction 305 368 - -
Vivi2g00073 379 MobiDBLite consensus disorder prediction 1 38 - -
Vivi2g00073 379 MobiDBLite consensus disorder prediction 1 27 - -
Vivi2g00073 379 PANTHER UNCHARACTERIZED 19 362 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vivi2g00073 379 Pfam Nse4 C-terminal 220 301 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00073 Vivi-Chr2 3243725 3246585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00073 40 378 Non-SMC Element family AT1G51130 51.714 4.57e-117 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00073 K22825 - gmx:100792117 494.967