Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00072 ATGGAATATTATAGTGTTGTGGGTTTGGTATTAGTCCTTTTGGTATGGATGATGAAACTTGGAAGAGTGAAACTTGGTCATCATCAGCTACCACCTGGACCAAGATGTTGGCCACTGGTTGGGAATATTTTCCAGCTAGGTTTGTCATTGTCGCCGCACGAGGCCTTTACAATACTTGCTCGCAAACACGGTCCTATCATGACTCTTTGGCTAGGTTCAATGTGCACAGTGGTTATCTCCTCCAGCGACGTAGCCCGTGATATGTTTAAAAACAATGACGCCGCTCTTGCAGGAAGGAAGATATACGAGTCCATGAAAGGGAATCATGACTATGGTAGCGAAGGTTCGCTCATAACTTCTCAGTACAACGAGCACTGGCGCATGCTGAGACGCTTGAGCACCACGGAGTTCTTTGTGACTAGTCGCTTAGACAGTATGCGAGGTGTGCGTGCCAAATGCATAGATCGCATGGTGAACTTGATAAATGAAGCTTCTGGCGATGGCAAGTCTGGCGTTGATGTTGGAAAATTCTTTTTCTTGATGGCTTTTAACCTCATTGGGAACCTTATTTTTTCAAAAGATTTGTTAGATCCGCAAATGGAGAGAGGAGCTAGATTCTATTACCATGCTGTGAAAGTTATGGAATATGCTGGGAAACCCAACGTCGCAGATTTCTTTCCTATGTTGAAGTGCCTTGACCCTCAAGGTATAAGGAGAAACACACAGTTCCACGTTGAAAGAGCCTTTGAGATAGCAGGATCATTCATCAAACAGAGGATGGAAAATGACACTGCAGACAGTGGAAACAGCAAAGATTTCTTAGATGTGCTCTTGCAGTTTCATGGGGATAGTGTCAGTGGCCCCTACAATTTTACTTCAAGAACTATAAACGTTGTTGTCTTTGAAATGTTCTCTGCAGGAACAGATACCACAACAAGCACACTAGAATGGGCTATGGCAGAACTTTTGAACAATCCAAGAACACTAAAGAAAGTGCAAATGGAAATAAGGAGCAAAATAGGGCAAGATAGGAAATTTGAAGAAAATGACATTGAGAATCTTCCCTACCTTAAAGCAGTTATCAAGGAGACATTGAGACTTCACCCACCTCTTCCTTTTCTGGTTCCTCACATGGCCATGGACTCTTGCAAAATTGGAGACTACTACATTCCCAAAGAGACACAAGTTTTAGTGAATGTTTGGGCAATTGGGAGGGACCCAAAAATGTGGGATGCTCCCTTGTTGTTTTGGCCAGAAAGGTTTATGGAGCCAAATGTGGCTGATTACAAGGGACATCATTTTGAGTATATACCTTTTGGTTCCGGTCGTAGAATGTGTCCGGCATTGCCACTTGCTTCGCGTCTACTTCCACTGGCCTTAGGCTCCCTCCTCAACTCCTTTGATTGGATTTTGCCTGATAGTCTTAAGCCCGAGGAGATGGACATGACAGAAGGAATGGGGATAACATTGAGGAAAGCCGTTCCTTTGAAAGCCATACCAGTGCCTTACAAATGA 1515 0.4376 MEYYSVVGLVLVLLVWMMKLGRVKLGHHQLPPGPRCWPLVGNIFQLGLSLSPHEAFTILARKHGPIMTLWLGSMCTVVISSSDVARDMFKNNDAALAGRKIYESMKGNHDYGSEGSLITSQYNEHWRMLRRLSTTEFFVTSRLDSMRGVRAKCIDRMVNLINEASGDGKSGVDVGKFFFLMAFNLIGNLIFSKDLLDPQMERGARFYYHAVKVMEYAGKPNVADFFPMLKCLDPQGIRRNTQFHVERAFEIAGSFIKQRMENDTADSGNSKDFLDVLLQFHGDSVSGPYNFTSRTINVVVFEMFSAGTDTTTSTLEWAMAELLNNPRTLKKVQMEIRSKIGQDRKFEENDIENLPYLKAVIKETLRLHPPLPFLVPHMAMDSCKIGDYYIPKETQVLVNVWAIGRDPKMWDAPLLFWPERFMEPNVADYKGHHFEYIPFGSGRRMCPALPLASRLLPLALGSLLNSFDWILPDSLKPEEMDMTEGMGITLRKAVPLKAIPVPYK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00072 504 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vivi2g00072 504 SUPERFAMILY Cytochrome P450 31 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 Pfam Cytochrome P450 31 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 502 - -
Vivi2g00072 504 CDD CYP76-like 60 500 - -
Vivi2g00072 504 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g00072 504 FunFam Cytochrome P450 76C4 22 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00072 Vivi-Chr2 3241413 3243210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00072 6 504 Cytochrome P450 AT3G52970 61.303 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00072 - - tpra:123898388 870.922