Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g00025 | ATGAAAACTCTAGAAGCTCAGTTTTCTCAGTCCAATGCATCATCATCACCATCACCATCAATTTATAATCACAAGAATGACATCAACATTTACAACAATACTATGCAGATGAATGTTTTTAACGGTGCTTATCATCATAATCTCCTTGTCGCAAGATCTTCACAGTCTCGTGAGCTACCATCCAATCAGACAGTTGTTGCTCCTACTAGTCATGTTGCATCTGTCGGGGTTCGTTTCAAGAAGAAAATTATTGATGATGGTATAATCCACACCCTACCACACAAGAAATACGGACCATATACATGTCCAAAGTGCTCTCAAGTGTTAGCTACTTCTCAGAAATTTGCTTCTCATGTGACTTCAAATCATTACAAGTTTGATAGTCCATAA | 390 | 0.3769 | MKTLEAQFSQSNASSSPSPSIYNHKNDINIYNNTMQMNVFNGAYHHNLLVARSSQSRELPSNQTVVAPTSHVASVGVRFKKKIIDDGIIHTLPHKKYGPYTCPKCSQVLATSQKFASHVTSNHYKFDSP | 129 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g00025 | 129 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 102 | 123 | IPR013087 | - | |
Vivi2g00025 | 129 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g00025 | Vivi-Chr2 | 1843794 | 1844183 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g00025 | 81 | 128 | C2H2 Transcription Factor Family | AT5G22990 | 62.500 | 1.72e-15 | 69.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Vivi2g00025 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g00025 | - | - | vvo:131648304 | 249.21 |