Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00024 ATGGATTCCAAAAACATATCCCCATCATTTCCTCCCTCTCTTCCTCTAGAATCTAATAGAAACCCTAGGCATAGTAAATGGGTATATGGCCACAACAATACACTCTCTTTCAATCTCTCACTCATAGAATACTCACCCTCAACTGTTATCAATAATTATGATAGTCATGCACCAGGAATAAGGAAAGCAATGAAACTTCTTGAAATTCAATTTTCTCATTCAAATGTATCAGCATCACCATCAGTATACAATAACGAGGATGTCCTCGATATTTACAACAACACAGTGCAGATGAATAATTTTAATGATGCTGATATTCCTAATCTCCTTGTCGCAGGATCATCGGAGTCACATGAGACACCATCAAATCAAACAACTTTTGTTACTAGTGATGATGTTACTTCTGTCGGGGTGTATTTCAAGAAGAAGAAAGTTGATGATGGTAGAACCCACAGTCTTCCTCACAAGAAATACGGACCGTACACGTGTCCAAAGTGCTACCAAGTGTTGGCTACTTCGCAAAAGTTTGCTTCTCATGTGACGTCAAATCACTACAAGTTTGATAGCCCAGAAGAGAGAAAAAAGAGATATATGTCTAGGAAGAAACCAGATCTCCAGATTCCTAAGCTCGATAATGGACAAACAACTTTTGTTCCTATTGTTCCATCTACTGATCGTACCACTTGTTGCTTCCTTTATCAATAA 705 0.3816 MDSKNISPSFPPSLPLESNRNPRHSKWVYGHNNTLSFNLSLIEYSPSTVINNYDSHAPGIRKAMKLLEIQFSHSNVSASPSVYNNEDVLDIYNNTVQMNNFNDADIPNLLVAGSSESHETPSNQTTFVTSDDVTSVGVYFKKKKVDDGRTHSLPHKKYGPYTCPKCYQVLATSQKFASHVTSNHYKFDSPEERKKRYMSRKKPDLQIPKLDNGQTTFVPIVPSTDRTTCCFLYQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00024 234 ProSitePatterns Zinc finger C2H2 type domain signature. 163 184 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00024 Vivi-Chr2 1816355 1817059 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00024 147 206 C2H2 Transcription Factor Family AT5G22990 65.000 2.36e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00024 - - vvo:131646857 259.996