Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00005 ATGTCTCGAGTTGAAGAGCTTTGGGAGCGGTTAGTTCGGGCTGCTTTGAGAAGGGAAAGAACTGGCGATGATGCATTTGGGCAACCTGCTGGTGGAATTGCGGGAAATGTGCCATCTGCGCTTGCTAAAAATAGAGATATTGATGAAATTTTAAGAGTAGCAGATGAAATTCAAGACGATGCTCCCACTGTTTCTCGAATATTATGTGAGCATGCATATTCATTATCTCAAAATTTGGACCCTAACAGTGAAGGCCGAGGTGTTTTACAATTCAAGACTGGTTTGATGTCTGTCATTAAGCAAAAGCTGGCTAAAAGGGAAGTTGGAACCATAGATAGAAGTCAGGACATTGCCCGATTACAGGAGTTCTACAAGAGTTACAGAAAGAAAAATAATGTGGATAAATTACTTGAGGAGGAAATGCAATTGAGGGAGTCTGGTGCTTTCAGCCGTAATCTTGGCGAGTTGGAGCGTAAGACTGTGAAGAGGAAAAGGGTTTTTGCTACCTTAAAGGTTTTAGGAACAGTACTTGAGCAGTTGAGTGAAGAAATTCCTGATGAGCTTAAGCGGGTCATGGAATCAGATTCTGCATCAACCGAGGATCTGATTGCTTACAACATCATCCCTATAGATGCTGCTTCTTCAACAAATGCTATTGCTTTTTTCCCCGAGGTGCAAGCAGCAATTTCAGCTCTGAAGTATTTCAATGGCTTGCCCGAACTGCCCAGGGCCTATTTCATCCCTCCTACGAGGAATGCCAACATGTTAGATTTTCTGCAGTATACTTTTGGATTTCAGAAAGATAATGTAGCCAATCAGCGGGAACACATAGTTCATCTGCTTGCAAATGAGCAATCTCGGCTTGGAGTTCCAGACAAAACCGAACCCAAATTGGATGACGCAGCCTTGCATGAAGTATTCCTCAAATCCCTTGATAATTATACTAATTGGTGCAACTATCTATGCATTCAGCCTGTCTGGAGCAGTTTGGAAGCTGTTAGTAAAGAGAAGAAATTGCTGTATGTTTCTTTATACCTCCTAATTTGGGGAGAAGCTTCAAATGTCAGGTTTCTACCTGAATGCTTGTGCTACATATTCCATCATATGGCTCGAGAGATGGATGAGATCTTAAGGCAGCAGGTTGCACATACAGCTAATAGTTGCACTTCTGAGAATGGTGTCTCATTTCTTGATCAAGTTATCCTTCCTCTCTATGAAGTTATTTCTGCAGAAGCTGCAAACAATGATAATGGGAAGGCATCTCATTCATCCTGGAGAAATTATGATGATTTTAATGAGTATTTCTGGTCATTACATTGCTTTGAGCTTAGCTGGCCGTGGCGCAAAAGTTCTTCATTTTTCCAAAAGCCCGAACATAGGTCTAAGAAAATGTCATCTGGCAGAAGTCAACGTCAGGGGAAAACATCTTTTGTGGAGCATCGGACTTTTTTTCATCTTTATCATAGTTTCCACCGATTATGGATATTTCTTTTCATGATGTTCCAGGGTCTAGCAATTATTGCTTTCAATAATGGAAGATTTGATGCCAAGACCTGGCGAGAGGTTCTTAGTCTTGGACCCACATTTGTTGTGATGAAATTTTTTGAGAGTGTCCTGGACATTTTCATGATGTACGGTGCATATAGAACGACGAGGCGTTCAGCTCTATCACGAATATTTCTAAGATTTATTTGGTTTAGCGTAACTTCAGTTTTTGTAACTTTCCTTTATGTAAAAGCACTTCAGGAAGAGAGTAAAGGAGATTCAAATTCAGTTATTTTCAAATTATACGTGCTTGTCATTGGGATTTATGCCGGTGTCCAGTTTTTCATTAGTTTCCTCATGCGGATTCCTGCATGTCATCTTCTGACGAACCGGTGTGATAGTTGGCCTCTCATTCGCTTTGTGAAATGGCTGCGCCAGGAACGGTATTATGTTGGACGGGGAATGTACGAAAGAAGTTTGGATTTCATAAAGTATATGCTGTTTTGGCTTGTCATTTTGAGTGCAAAATTTTCGTTTGCTTACTTTCTTCAGATCAAGCCACTTGTAGCCCCGACAAGGGATATAATAAAAGAAAATAATATAGTGTACTCTTGGCATGATTTTGTCTCTAAAAATAATCACAATGCTCTGACAGTTATTAGCATATGGGCTCCAGTGGTTTGCATTTATCTATTGGACATTTATGTGTTTTATACACTTGTATCGGCTGTCTGGGGATTCTTGCTGGGTGCAAGAGCTCGTCTCGGTGAGATAAGGTCATTGGAGGCGCTACAAAAGCTTTTTGAGCAGTTTCCTGGAGCTTTCATGGACAATCTTCATGTTGCTCTACCCAACAGGAATGCCCAACTGTCATCAGTTCAGGTTGTTGAAAAGAACAAGGTTGATGCTGCTCGATTCTCCCCGTTTTGGAATGAGATTATACGAAATCTAAGGGAGGAAGATTATATAGCCAACTTTGAACTGGAGTTGCTTTTAATGCCAAGAAATTCAGGAGATATTCCTTTGGTTCAGTGGCCACTCTTTCTACTTGCAAGCAAGATATTTTTGGCCCGGGATATTGCTGTTGAGAATAAAGATGATACTCAAGATGAGCTTTTTGATAGGATTTCACGTGATGAATATATGATGTATGCAGTTCAGGAGTGTTACTATGCTATTAAACTCATTTTAACAGAAGTATTAGATGATGCTGGAAGGATGTGGGTTGAAAGGATATATGATGATATTAATGCCAGTATCACAAAAAGAAGTATTCCTAGGGACTTTCGACTAAATAAGTTGGCTGTTGTGATATCAAGAATAACTGCACTGATGGGAATTCTGAAAGAGACTGAAACACCTGATCTTGAAAGAGGTGCAGTTAGGGCTGTTCAGGATCTCTATGATGTTGTACGACATGATGTCCTTTCTCTAAATATGAGGGATCATTATGACACATGGAGTATACTGACCAAAGCTAGAGATGAAGGGCATTTGTTTCAAAAGTTAAAATGGCCAAATGCAGACTTAAGAATGCAAGTCAAAAGATTATATTCATTGCTGACTATCAAAGACTCTGCGTCAAGCGTTCCTAGAAATCTTGAGGCTAGGCGAAGGCTGGAGTTTTTTGCAAATTCACTCTTTATGAAGATGCCTCAAGCAAAGCCAGTTCAACAAATGTTATCTTTTAGTGTTTTCACCCCTTACTATTCTGAGATAGTGCTTTATAGCATGGCTGAACTTCAAAAGAAAAATGAAGATGGTATTTCAATTTTGTTCTATCTTCAGAAGATATTTCCAGATGAGTGGCAAAACTTTCTTGCTAGAATCGGCCGTGATGAAAATTCAAGTGACACTGATCTTTTCGATAGTCCTGGTGATATTCTTGAACTGCGCTTTTGGGCTTCTTATCGAGGGCAAACATTGGCCAGAACTGTTCGAGGGATGATGTATTACAGGAAAGCTCTTATGCTTCAGACCTATTTAGAGAGGACCACAGGTGGAGATTTGGAGACTGGAGATGGTTTTGATGAAGTATCTGATACACGTGGCTTTGATTTATCCCCGGAAGCACGTGCTCAGGCGGATCTGAAGTTCACTTATGTTGTGACATGTCAAATTTATGGTAAGCAGAAAGAGGAGCAAAAGCCTGAAGCTGTTGATATCGCTTTACTTATGCAAAGAAATGAAGCTCTTCGCGTGGCTTTCATTGATGTTGTTGAAACTTTAAGAGATGGACAAGTGAACACGGAATACTACTCAAAGCTTGTCAAAGCTGATATTAATGGAAAAGACAAGGAAATATACTCGGTGAAATTACCTGGAAATCCTAAACTTGGTGAAGGGAAGCCCGAGAATCAAAATCATGCAATTGTATTTACCCGTGGGAATGCCGTTCAAACAATTGACATGAATCAGGATAACTATTTTGAGGAGGCTTTGAAGATGAGAAATCTTCTTGAGGAATTTCATTCTGACCATGGTCTTCGTCCTCCCACTATACTTGGTGTTAGAGAGCACGTCTTTACTGGAAGTGTGTCATCTTTGGCTTCATTCATGTCCAATCAAGAAACTAGTTTTGTGACTTTGGGTCAGCGGGTTTTAGCAAATCCTTTGAAGGTTCGGATGCATTATGGTCATCCTGATGTTTTTGATAGAGTGTTTCATATAACCCGTGGTGGTATCAGCAAGGCTTCTCGTGTTATCAATATTAGTGAAGATATTTACTCAGGATTCAATTCAACCTTGCGACAAGGAAACATTACTCATCATGAATATATTCAGGTTGGTAAGGGAAGAGATGTCGGCCTCAATCAAATTGCACTATTTGAGGGGAAGGTTTCAAGTGGTAATGGTGAACAAGTTCTCAGTCGGGATATATACAGACTTGGGCAACTTTTTGATTTCTTCCGGATGATGTCTTTTTACTTCACAACAGTTGGGTACTACTTTTGTACCATGTTAACAGTGCTGACCGTTTATGCCTTTCTATATGGAAAAACGTACTTGGCACTCTCTGGTGTTGGAGAAGAAATTGAAGGAAGGGCCAAGATAACCAAGAACACGGCTCTGAGTGCTGCTTTAAATACACAATTTCTCTTCCAAATTGGTATCTTCACTGCTGTGCCAATGGTCTTGGGCTTTATTCTTGAACAAGGCTTCTTGAGGGCTGTTGTCAATTTTATCACGATGCAGTTTCAGCTCTGCACTGTTTTTTTCACTTTTTCTTTGGGTACAAGAACCCATTATTTTGGAAGGACAATACTTCATGGTGGTGCAAGGTATCAAGCGACTGGCCGAGGGTTTGTCGTCCGCCATATCAAATTTTCCGAAAACTACAGACTCTACTCTCGTAGCCATTTTGTTAAAGGGTTGGAAGTTGTGCTTCTGTTGGTAGTATATCTTGCTTATGGCTACAGTGACGGTGCACTATCATACATTCTTTTGAGTATAAGCAGTTGGTTTATGGCTCTATCCTGGTTGTTTGCTCCATATTTATTCAACCCATCTGGATTTGAGTGGCAAAAGGTAGTCTCAGACTTCCGAGATTGGACAAATTGGCTTCTCTATAGAGGTGGAATTGGTGTTAAGGGAGAAGAAAGCTGGGAAGCTTGGTGGGAAGAAGAACTGGCTCATATCAGGAGCTTCGGTTCTAGGATAGCAGAGACCATCCTGAGTCTGAGATTTTTCATTTTTCAATATGGTATTGTTTACAAGCTTGATGTGAAAGGAATGGATACTTCATTGACGATTTATGGATTCTCATGGGTTGTGCTGGCAGTGTTAATAGTTCTTTTTAAGGTATTCACCTTTAGCCAGAAGGTATCAGTCAACTTCCAGCTTGTGCTGCGATTTGTACAAGGTCTATCTCTCTTGTTAGCACTGGCTGGTTTGATTGTAGCAGTTGTTTTGACGGACCTATCAGTAACAGACATATTTGCTTCTATTTTAGCATTCGTTCCTACTGGATGGGGAATTTTATCGATTGCTGCTGCTTGGAAGCCTGTCATGAAGAAGCTAGGGCTGTGGAAGTTTGTTCGATCGATTGCTCGTCTATATGATGCTGCCATGGGCATGCTCATCTTTGTGCCAATCGCATTCTTTTCATGGTTTCCATTTGTATCAACATTCCAAACTCGCCTCATGTTTAACCAGGCATTTAGCCGAGGGTTAGAAATTTCTCTAATCCTTGCAGGGAACAATCCCAATACCGGGATATAG 5706 0.4052 MSRVEELWERLVRAALRRERTGDDAFGQPAGGIAGNVPSALAKNRDIDEILRVADEIQDDAPTVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREVGTIDRSQDIARLQEFYKSYRKKNNVDKLLEEEMQLRESGAFSRNLGELERKTVKRKRVFATLKVLGTVLEQLSEEIPDELKRVMESDSASTEDLIAYNIIPIDAASSTNAIAFFPEVQAAISALKYFNGLPELPRAYFIPPTRNANMLDFLQYTFGFQKDNVANQREHIVHLLANEQSRLGVPDKTEPKLDDAALHEVFLKSLDNYTNWCNYLCIQPVWSSLEAVSKEKKLLYVSLYLLIWGEASNVRFLPECLCYIFHHMAREMDEILRQQVAHTANSCTSENGVSFLDQVILPLYEVISAEAANNDNGKASHSSWRNYDDFNEYFWSLHCFELSWPWRKSSSFFQKPEHRSKKMSSGRSQRQGKTSFVEHRTFFHLYHSFHRLWIFLFMMFQGLAIIAFNNGRFDAKTWREVLSLGPTFVVMKFFESVLDIFMMYGAYRTTRRSALSRIFLRFIWFSVTSVFVTFLYVKALQEESKGDSNSVIFKLYVLVIGIYAGVQFFISFLMRIPACHLLTNRCDSWPLIRFVKWLRQERYYVGRGMYERSLDFIKYMLFWLVILSAKFSFAYFLQIKPLVAPTRDIIKENNIVYSWHDFVSKNNHNALTVISIWAPVVCIYLLDIYVFYTLVSAVWGFLLGARARLGEIRSLEALQKLFEQFPGAFMDNLHVALPNRNAQLSSVQVVEKNKVDAARFSPFWNEIIRNLREEDYIANFELELLLMPRNSGDIPLVQWPLFLLASKIFLARDIAVENKDDTQDELFDRISRDEYMMYAVQECYYAIKLILTEVLDDAGRMWVERIYDDINASITKRSIPRDFRLNKLAVVISRITALMGILKETETPDLERGAVRAVQDLYDVVRHDVLSLNMRDHYDTWSILTKARDEGHLFQKLKWPNADLRMQVKRLYSLLTIKDSASSVPRNLEARRRLEFFANSLFMKMPQAKPVQQMLSFSVFTPYYSEIVLYSMAELQKKNEDGISILFYLQKIFPDEWQNFLARIGRDENSSDTDLFDSPGDILELRFWASYRGQTLARTVRGMMYYRKALMLQTYLERTTGGDLETGDGFDEVSDTRGFDLSPEARAQADLKFTYVVTCQIYGKQKEEQKPEAVDIALLMQRNEALRVAFIDVVETLRDGQVNTEYYSKLVKADINGKDKEIYSVKLPGNPKLGEGKPENQNHAIVFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFHSDHGLRPPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVSSGNGEQVLSRDIYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGEEIEGRAKITKNTALSAALNTQFLFQIGIFTAVPMVLGFILEQGFLRAVVNFITMQFQLCTVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLVVYLAYGYSDGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQKVVSDFRDWTNWLLYRGGIGVKGEESWEAWWEEELAHIRSFGSRIAETILSLRFFIFQYGIVYKLDVKGMDTSLTIYGFSWVVLAVLIVLFKVFTFSQKVSVNFQLVLRFVQGLSLLLALAGLIVAVVLTDLSVTDIFASILAFVPTGWGILSIAAAWKPVMKKLGLWKFVRSIARLYDAAMGMLIFVPIAFFSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGI 1901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00005 1901 SMART FKS1_dom1_2 336 448 IPR026899 -
Vivi2g00005 1901 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 338 445 IPR026899 -
Vivi2g00005 1901 Gene3D - 34 193 IPR023175 -
Vivi2g00005 1901 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 164 1894 - -
Vivi2g00005 1901 Pfam 1,3-beta-glucan synthase component 1025 1714 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00005 Vivi-Chr2 738234 784637 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00005 1 1901 Cell Wall Biosynthesis AT3G07160 75.824 0.0 3014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00005 K11000 - gmx:100811473 3369.71