Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi297g00003 ATGATCGCTTACCGTCCTATGGAAATTTTTAACCTGCGCGATTTTCACCACGCTGTTAAACGCTTGCCATCAGATGCCTTTCTATTTGATATGGATAACGTATCTGATGTAACGATTTCAGATGTTTTGAGCGAACGAGTATTGTACTCTTGGCAAGGTAAAGATATTAAGAGAAAAGTGATAGAACAGGAGGACACTTGCTTATTCTACTGTTGGTACACCAGATTATATTACTCCAGAAGTTCTTTTGAGAAAGGGTATGCAATAGAATGTGATTGGTGGTCACTTGGCGCTATCATGTATGAAATGTTGGTGGGATATCCTCCTTTTTATTCTGATGATCCAATGACAACATGTAGGAAGATAGTGAACTGGAGAACTCACTTGAAATTTCTTGAGGAAGTTGGGCTATCGCCAGAGGCCAAAGATCTTATTAGTAGAATTTTATGTAATGTCAATAATAGGCTGGGATCAAAAGGCTCATCGGTTCTTCAAAGGTGTTGA 504 0.3889 MIAYRPMEIFNLRDFHHAVKRLPSDAFLFDMDNVSDVTISDVLSERVLYSWQGKDIKRKVIEQEDTCLFYCWYTRLYYSRSSFEKGYAIECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWRTHLKFLEEVGLSPEAKDLISRILCNVNNRLGSKGSSVLQRC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi297g00003 167 SUPERFAMILY Protein kinase-like (PK-like) 64 156 IPR011009 -
Vivi297g00003 167 Gene3D Transferase(Phosphotransferase) domain 1 13 165 - -
Vivi297g00003 167 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi297g00003 167 Pfam Protein kinase domain 84 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi297g00003 167 SMART serkin_6 4 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi297g00003 167 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 85 158 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi297g00003 83 165 AGC Kinase Gene Family AT4G14350 75.904 3.18e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Vivi297g00003 Pkinase 1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi297g00003 K08790 - vvo:131628512 353.214