Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi294g00020 ATGTCATCTTCATCTATAACTTTGAAAGGTTCTTACACTGTGAGACCATCAGAACCAACATTAAGCGAATGGGATCAATTTGGAATTATAACCCATGTTCCAACTATTTACTTTTACCGCCCCCCACAAAATTGGCTTACTCCTCCTATTAAAATTGCCACCACTCTGAAAGATTCACTAAGCAAAGTTCTGGTGCATTTTTATCCACTTGCTGGACGTTTACAATGGAAAACGAATGGTCGTTTTGAATTGGAATGCAATGCAAAGGGTGCTCAGTTCATCGAAGCGGAATCCTCGTCAACATTATCCGATTTCCGTGACTTTTCATCTTCTTCAAAAAATGATTACCGCAACCTTTTTCCATTTGTTGATTACACACTCCCGATTGAAGAACTTCCATTGGTTATTATTCAGCTCACGAATTTCAAATGTGGAGGCATTAGCATTAGTATGTTAGTCTCACATGCGGTTGTTGATGGACGAAGTGCATCCCATTTCTTTTGTGAGTGGGCTCAACTTGCACGTGGAGAGCCTTTGAATAGGGTTCCGTTTCTCCATAGCAACATGTTAAATGATGGGAAATCATGCAATGGTGTTAAAGAGTGGAATTTTAGTGAGCTTCCGGTTTTGCTGGGAAATTTAAAAAGTAACGTTGAGAAAAAAAAGAACAAAACAACTGTTGCTAAAGTCAAAGTTAGCAAAATACAAGTTGAAAAATTGAGAAAAATAGCGAATGAGAGTTGGAATAAGTCTAGCAATGATCGAAGTTATTCAAGGTATGAAACGATAACTGGTCATCTTTGGAGAAGTGCGTGTAAAGCTAGAGGGCATGAAAATGACCAACCAACTTGGCTCGGCGTAAGTGTTGATTGGAGGAGTCGTGTAAAACCTAATTTATCTAAAGAGTATTTTGGGAATGCGACAATGGATGTGATGGCTACTAGTCTTGCAGGTGATTTGATATCTAAGCCATTAGGATATGCTTCGAGTAGGATAAGGGAAGCAATTGAGAAGGTGGATGATGATTATGTGAGGATGGTGAGTGAGTGCATTAAGAAACAAGATGATTTGACTAAGTTTCAAAATTTGGATGAAGTAGTAAGTGGTAACATTGTTCCTTTTTATAAAAATCCTAATTTAGGAGTGATTAGTTGGTTGACATTGCCGTTACACGGACTTGATTTTGGATGGGGGAAGGCGGTTTATATGGAGCCAGGAATACATGAGATATATGAAGGAGAATCGTTGATTCTTCCTACTCTTCATGATGACGGATCTTTGTTGATTTTTATTTGTTTGCAAGAGGTTTATATGGATGCTTTTAAAAGATATTTTTATGAAGGTATTGAGTTGGACACAGTTGTAAAATGA 1371 0.3786 MSSSSITLKGSYTVRPSEPTLSEWDQFGIITHVPTIYFYRPPQNWLTPPIKIATTLKDSLSKVLVHFYPLAGRLQWKTNGRFELECNAKGAQFIEAESSSTLSDFRDFSSSSKNDYRNLFPFVDYTLPIEELPLVIIQLTNFKCGGISISMLVSHAVVDGRSASHFFCEWAQLARGEPLNRVPFLHSNMLNDGKSCNGVKEWNFSELPVLLGNLKSNVEKKKNKTTVAKVKVSKIQVEKLRKIANESWNKSSNDRSYSRYETITGHLWRSACKARGHENDQPTWLGVSVDWRSRVKPNLSKEYFGNATMDVMATSLAGDLISKPLGYASSRIREAIEKVDDDYVRMVSECIKKQDDLTKFQNLDEVVSGNIVPFYKNPNLGVISWLTLPLHGLDFGWGKAVYMEPGIHEIYEGESLILPTLHDDGSLLIFICLQEVYMDAFKRYFYEGIELDTVVK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi294g00020 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 443 - -
Vivi294g00020 456 Gene3D - 214 448 IPR023213 -
Vivi294g00020 456 FunFam Tryptamine hydroxycinnamoyl transferase 213 446 - -
Vivi294g00020 456 Pfam Transferase family 5 446 - -
Vivi294g00020 456 Gene3D - 1 199 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi294g00020 6 447 Monolignol Biosynthesis Gene Families AT5G48930 36.585 1.86e-94 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi294g00020 K13065 - gmx:100777007 501.13