Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi294g00007 ATGAGAACATTTACATTACAACAAATTAGAGCAGCCTCGGATGAATTCAGTCCTGCTAATAAGGTTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAATTATCTGATGGCACATGGGTAGCAGTCAAACAGCTCTCCTCGAAGTCTCGGCAGGGAAACAGTGAATTTTTAAAGGAGATGGGCATGATATTTTGTTTACAGCATCCTAATCTAGTGAAACTTCATGGATGTTGCATTGAAGGGGATCAACTAATATTGGTGTATGAGTACATGGAGAATAATAGCTTGGTCCATGCTTTATTCAGTTTAGAAAACCGGCTTAAACTTGATTGGCCATCAAGGCTTATGATCTGCATTGGTGTTGGAGCGATTGTAGATTTAGCTTCAGTTCCAACACTTCATTCGCATGCTATGGTATATGCCATTGTTGAGTTTTTTAAACTTGCAACATGCTTACATGCATGCTCATCCATCATCGAAATATTCGAACTGTCGGTCTCGGATCAATATTGGACAGAAGTTTTTGCCCAGGCTTTATAA 543 0.4033 MRTFTLQQIRAASDEFSPANKVGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNSEFLKEMGMIFCLQHPNLVKLHGCCIEGDQLILVYEYMENNSLVHALFSLENRLKLDWPSRLMICIGVGAIVDLASVPTLHSHAMVYAIVEFFKLATCLHACSSIIEIFELSVSDQYWTEVFAQAL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi294g00007 180 Gene3D Transferase(Phosphotransferase) domain 1 2 154 - -
Vivi294g00007 180 Pfam Protein tyrosine and serine/threonine kinase 20 120 IPR001245 GO:0004672|GO:0006468
Vivi294g00007 180 ProSiteProfiles Protein kinase domain profile. 16 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi294g00007 180 SUPERFAMILY Protein kinase-like (PK-like) 3 123 IPR011009 -
Vivi294g00007 180 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 1 91 - -
Vivi294g00007 180 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 122 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi294g00007 3 122 Receptor kinase-like Gene Family AT1G53430 67.769 4.10e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi294g00007 PK_Tyr_Ser-Thr 3.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi294g00007 - - vvo:131628451 366.311