Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi293g00016 ATGGATGTGAATTTGTCACAAGGTGGTGTTGGAAATTCTTTTGGTGGGTTTGATTTACCTGGATCAATTCAGGTTCATCATCAAGCACACCATCCTCACACCATTCATCAACATCAACCTCATCCGAATCCGCGTCAAGGGTCTTCGATACATTCGTCGGTTCATGATGGGTTTTCGCTCTTGCAGAACTGTGATCAAACTGTTTCGATGACGGATTACAGTAAGGGAGAGAGAAGTAAGAACTCGACGAGTGATGAGGATGAGCCGAGTTTTAACGAGGAGGGTTTTGAGGCTCAACATGAAGGGGGTAGAGGTAAAAAGGGACCGTCTTCGCCTTGGCAGCGTGTGAAGTGGGATGATAAGATGGTGAGGCTTATGATTACTGCTGTTTCGTATATAGGCGAGGATATAACTTCTGATGGTGGTGGCGGTGGAAGAAGGAAATTTACGGTTTTACAGAAGAAGGGTAAGTGGAAATCTGTATCTAAGGTTATGGCTGAAAGAGGTTATCATGTTTCGCCGCAACAATGCGAGGATAAGTTCAATGATCTTAATAAAAGGTATAAAAAGCTTAACGATATGTTAGGGAGAGGGACTTCTTGTGAGGTTGTTGAAAATCCTTCGCTTTTGGATGTAATTAATTTTCTTTCTGAGAAAGAAAAGGATGATGTTCGGAAAATATTAAGCTCGAAACACTTGTTTTATGAAGAGATGTGTTCTTATCATAATGGTAATAGGTTGCATTTGCCGCATGATCCTGCATTGCAATGCTCGATGCAGTTAGCTCTCCGAAATAGGGATGATCATGATCATGATAATGAAGATATCAGAATGTCCCATGTCGAGGATCACGATGATGACGAGCATGATGTTGAAATTGATGAACGCGATGATTTTAAAGTGCACTGTGCTTCCCGTGGTGATAGCAGAGGAGTATATGAGCGGTTAGGTGGATCTATGAAGAACTTGAAACAAATCCAAGGCCAAGAAGATGGTAATACTTCAAATTGTCAAGATTATTTTAACCAAGGTTTGCATCCACGTGGACAAACGGTTCCTCATAACGGTAATCAAGTTTTATCCGAAAACACGAGAGCAACATGGTTACAGAAGCAATGGGTTGACATGCGCCAAGTTCAATTAGAAGAGCAAAAGCTACAAATTCAGGCCGAGACGTTGGAATTAGAGAAACAAAGATTCAAGTGGCAGAGGTTTAGTAAGAAAAAGGACCGGGAGTTGGAGAAGATGAGTCTAGAAAACGAAAGAATGAAGCTTGAAAATGAACGCATGGCTTTGGAATTGAAGCGAAAGGAAATGGGCATCAGCTTTAACTAG 1335 0.415 MDVNLSQGGVGNSFGGFDLPGSIQVHHQAHHPHTIHQHQPHPNPRQGSSIHSSVHDGFSLLQNCDQTVSMTDYSKGERSKNSTSDEDEPSFNEEGFEAQHEGGRGKKGPSSPWQRVKWDDKMVRLMITAVSYIGEDITSDGGGGGRRKFTVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCEVVENPSLLDVINFLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQCSMQLALRNRDDHDHDNEDIRMSHVEDHDDDEHDVEIDERDDFKVHCASRGDSRGVYERLGGSMKNLKQIQGQEDGNTSNCQDYFNQGLHPRGQTVPHNGNQVLSENTRATWLQKQWVDMRQVQLEEQKLQIQAETLELEKQRFKWQRFSKKKDRELEKMSLENERMKLENERMALELKRKEMGISFN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi293g00016 444 PANTHER F16F4.11 PROTEIN-RELATED 6 443 - -
Vivi293g00016 444 Coils Coil 406 438 - -
Vivi293g00016 444 Coils Coil 376 398 - -
Vivi293g00016 444 MobiDBLite consensus disorder prediction 39 53 - -
Vivi293g00016 444 Gene3D - 118 190 - -
Vivi293g00016 444 Pfam Myb/SANT-like DNA-binding domain 115 241 IPR044822 -
Vivi293g00016 444 MobiDBLite consensus disorder prediction 78 104 - -
Vivi293g00016 444 MobiDBLite consensus disorder prediction 72 114 - -
Vivi293g00016 444 MobiDBLite consensus disorder prediction 16 53 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi293g00016 Myb_DNA-bind_4 7.6e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi293g00016 - - tpra:123906894 702.975