Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi293g00004 ATGGATATGCTCAGCTTCATCGGAGCTACTCCGGCTACGGCTGACAACCACCACCGCCCCACTTCCAATTGTACCAACCCCCTTGATTTCGATCCAGCATTGGAAAACATGCTTAACATGGATCTTAGTCAATTCGACTTCAGCCTCTTCGACATCCCATTGCCGCCTTCTTCATTGCCGCCTATTGATCGGATTCCTGCACCTGCACCTGCACCTGCACAGACGCAACTGCTTCCAAACTTCTCTGAGGTATTATCTGATAATGTCAATTTGATTGGAAGGAATAGTGCCCTAACTGCAGGCGGTGGAAACGGCGGTGGTGGAGGGAGTGTATTAGGCCACCGCCGTGACAGCAACCGTTTTGGTTTAGGTAGCGGGTCCTCAGCACCATTCTCTTATAAGAAGAGGACAGTTATACCTCCGGAAAAGCTTGCGGAACTTGAAATTGCTGATCCCAGAAAAGCACAGAGGATTATTTCTAATCGGGTTGCTGCTAAGAAATCCAAGGAAAGGAAAAGAAATTATGAAAAAGAGTTGGAAAAAAGAGTTGAGTTGCTTCAGATTAGAGCTGATAATGTAACTGCGGAGCGTGTGATGGCGATGAATGAAGTTACGCAGTTAGCTGCTGAGCGCAAGAGGATCAAAGACCTGATAGAGTCTACTTTACAGCATCAACAAAAGCAAAGAGCTGTGATTGAATTGATGAAGCAAGAAGCAAATATGCTGAAGAGGCAAATTCATGACATGAATACAGCAATGGCTGATTTATCTTTTGGTGAACCAGTCTCTCAGTCCCAGCAGCCTCAGGTTCCTCATCAGCCAGAACTCTACATACCACAGCAGCCACCTCTAGTTCCTCCTCCACCATCTATCTTTGGCGAGCCTTTGCTTCCTCCTCCACCATTTTCCTTAGGCGAGCCTTTACTTCCTACTCCATCATCTACCTTTGGTGAGCCTTTAGTTCCTCCTCCGCCATCTCTCTTTGGCGAGCCTTTTATTGGCACCAGCTTTTCAAACTACAATCTCTGGAACTAG 1035 0.4676 MDMLSFIGATPATADNHHRPTSNCTNPLDFDPALENMLNMDLSQFDFSLFDIPLPPSSLPPIDRIPAPAPAPAQTQLLPNFSEVLSDNVNLIGRNSALTAGGGNGGGGGSVLGHRRDSNRFGLGSGSSAPFSYKKRTVIPPEKLAELEIADPRKAQRIISNRVAAKKSKERKRNYEKELEKRVELLQIRADNVTAERVMAMNEVTQLAAERKRIKDLIESTLQHQQKQRAVIELMKQEANMLKRQIHDMNTAMADLSFGEPVSQSQQPQVPHQPELYIPQQPPLVPPPPSIFGEPLLPPPPFSLGEPLLPTPSSTFGEPLVPPPPSLFGEPFIGTSFSNYNLWN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi293g00004 344 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 61 275 - -
Vivi293g00004 344 Coils Coil 232 252 - -
Vivi293g00004 344 Gene3D - 153 204 - -
Vivi293g00004 344 MobiDBLite consensus disorder prediction 97 126 - -
Vivi293g00004 344 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 151 214 IPR004827 GO:0003700|GO:0006355
Vivi293g00004 344 SUPERFAMILY Leucine zipper domain 153 207 IPR046347 GO:0003700|GO:0006355
Vivi293g00004 344 Coils Coil 165 196 - -
Vivi293g00004 344 SMART brlzneu 149 213 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi293g00004 108 243 bZIP Transcription Factor Family AT2G40620 36.496 4.72e-19 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi293g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi293g00004 - K20557 vvo:131628415 604.749