Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi293g00003 ATGGAGAGTGAAGAAGAAAACAACATGGCATTGACAGTGGCTTTTATTCATGATGCTAATAGCCTCTCAAAAGAAGAAGAGAGACATGATAAACTTGATGAAAACAATAGTGACAGACTTGCTATCACTCAGTGCATTGGGGAAACAGATACTCATTTGGATGCACTCATTTCCCGCTATGCACACACTCTAACCAACTGCAACTTGCGTAACTTAGGGTACCCTACAAATCAAGACTTCAACTATGAGACATTGGCACCGTTGATTCAATTTCATTTGAACAATGCTGGAGATCCATTTCTTGGAAGCAGTTTCTCTCTAAACTCAATGAAATTTGAAGTTAGTGTGCTTGATTGGTTTGCTAAACTATGGGAAATTGAGAAGAATGAATACTGGGGATATGTCACTACTGGTGGAACCGAAGGCAATCTTCATGGAATTTTAGTAGGGAGAGAGCAACTTCCGGATGGAATTCTATATACATCAGAAGATTCACATTATTCGATATACAAAATAGCAAGAATGTATAGAATGAAATGTGTGAAGGTTGGCTCTTTGATATCTGGTGAAATTGATTGTGATAAACTAGAGGTTTCTCTACTTGCCAACAAGGACAAACCAGCCATCATCAATCTAAATATAGGGACAACTTTGAAAGGAGGTATTGATGATCTTGATCTAGTAATAAAAATACTTTATAAATGTGGATTTACTAATGATCAGTTCTATATTCACTGTGATGGAGCTCTATATGGAATCATGCTACCTTTTATTAAACAAGCTCTAAGGATTAGCTTCAAGAAACCTATTGGAAGTATAACTATTTCAGGTCATAAGTTTTTGGGATGTCCATCTCCTTGTGGTGTTTTGATAACTCGTTTGAAATACATCAACTCATTTTCAAGAGATGTTGACATTATTGCTTCAAGAGATGCCACAATCACAGGTAGTCGTTGTGGACATGCTCCTATCTTCCTTTGGTATGCTCTTAAAAAAAGGGGTTTCATAGGACTTGAGAATGAAGTGCATGATTGCATATTCAAAGCTCGTTACTTACTAAATCAACTACGTGATGCTGGAATTAGTGTAATGTTAAACGAGTATAGCAACATAGTTGTCTTTGAGAGACCCTTAGATGATAACTTTACTCGTCGATGGAATTTGGCATGCAATAAAAACATTTCACACGTGGTAGCATTGAAGCATGTGACTATTGAAATGCTTGACACATTTGTTTGTGAATTTGTCCAAAAACGATCCATTTGGTATAAGGATGGACAACTTCAGCCTCTATGCATTTCACACGATGTTGGTTCTATAAATTGTGCTTGTTCGATACACAAATTATCAAAAAATTATTAG 1362 0.3634 MESEEENNMALTVAFIHDANSLSKEEERHDKLDENNSDRLAITQCIGETDTHLDALISRYAHTLTNCNLRNLGYPTNQDFNYETLAPLIQFHLNNAGDPFLGSSFSLNSMKFEVSVLDWFAKLWEIEKNEYWGYVTTGGTEGNLHGILVGREQLPDGILYTSEDSHYSIYKIARMYRMKCVKVGSLISGEIDCDKLEVSLLANKDKPAIINLNIGTTLKGGIDDLDLVIKILYKCGFTNDQFYIHCDGALYGIMLPFIKQALRISFKKPIGSITISGHKFLGCPSPCGVLITRLKYINSFSRDVDIIASRDATITGSRCGHAPIFLWYALKKRGFIGLENEVHDCIFKARYLLNQLRDAGISVMLNEYSNIVVFERPLDDNFTRRWNLACNKNISHVVALKHVTIEMLDTFVCEFVQKRSIWYKDGQLQPLCISHDVGSINCACSIHKLSKNY 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi293g00003 453 Gene3D - 89 332 IPR015421 GO:0003824
Vivi293g00003 453 Gene3D Aspartate Aminotransferase, domain 1 333 419 IPR015422 GO:0003824
Vivi293g00003 453 PANTHER - 33 448 - -
Vivi293g00003 453 Pfam Pyridoxal-dependent decarboxylase conserved domain 111 366 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vivi293g00003 453 SUPERFAMILY PLP-dependent transferases 72 416 IPR015424 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi293g00003 214 346 Calmodulin-binding Proteins AT1G65960 28.571 8.44e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi293g00003 K25193 - gmx:100781665 651.358