Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi292g00004 ATGGCGAAGATCAAGAAATTAACAAGAGATCTTGCAACTGAGTTTGAGCCTTGCTCAAAGCTTGAGGACCTAAATTTGGATGTTATAAAGAACTCCAAGGAAACAAAAGAAAAATTTGTTACTGACAGCTTTTCTCAGAGGCATGAAAATTCAAGTGTCCCAGTTCATGAAATAATATTTTCTGCTGTTGACAAACCAAAGCTTTTAAGTCAGCTGTCCGCTTTGCTGTCTGATATTGGGCTTAACATCCGTGAAGCACATGTATTTTCTACAACTGATGGCTACTCCCTCGATGTTTTTGTGGTAGATGGATGGCCACTAGAGGAAACCGATGGGTTGTACGCTGCTATGGAAAAAGCTGTAGCAAGGAGTGAGGGGTCATGGTCTCATTCTTCAAATTCTCATTCAGCTGTGGCAAAAGCCTTAGCAGCAGAAGGAAAATCTGGGGACTGGGAAATAGACAGGAGGTCGTTAAAGATAGGAGAAAAAATAGCATCTGGATCATGTGGAGATTTGTATCATGGAGTTTATCTTGGTGAAGATGTAGCTGTTAAGGTTTTGAAATCTGGGCAACTGAATGATGCCTTAGAAGATGAGTTTACGCAAGAAGTAGCAATTTTGAGACAGGTGCATCATAAAAATGTTGTTCGTTTCATTGGTGCATGCACAAAGTGTCCACATTTGTGCATAGTAACAGAGTATATGACTGGGGGAAGTCTGTATGATTACTTGCACAAAAATCGTAATGTCTTGGAGCTGTCTCAATTACTCAAGTTTTCAATTGATGTCTGCAAGGGAATGGAGTATTTGCATGGAAATAACATAATTCACAGGGATCTGAAGACAGCCAATTTGCTGATGGATACTCACAATGTTGTTAAAGTGGCAGATTTTGGAGTTGCTCGGTTCCTTATCCAGGGTGGAGTGATGACTGCAGAGACTGGAACTTATAGATGGATGGCACCAGAGGTCATAAACCACCAGCCTTATGATCAGAAGGCAGATGTATTCAGTTTTTCCATAGTACTATGGGAACTAGTGACAGCAAAGGTACCATATGATACCATGACTCCACTACAAGCTGCTTTGGGTGTGAGACAGGGACTGAGACCAGAACTTCCAAAGCATGGGCACCCTAAACTATTAGATTTGATGCAAAGATGTTGGGAAGCAATTCCAAGCAGTCGTCCAGCCTTCAATGAGATAAGAGTTGAACTTGAAAATCTTTTGCTAGAAGTGGAGAATAATTTAGAAGCTAATGGTGCTTAA 1269 0.409 MAKIKKLTRDLATEFEPCSKLEDLNLDVIKNSKETKEKFVTDSFSQRHENSSVPVHEIIFSAVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPLEETDGLYAAMEKAVARSEGSWSHSSNSHSAVAKALAAEGKSGDWEIDRRSLKIGEKIASGSCGDLYHGVYLGEDVAVKVLKSGQLNDALEDEFTQEVAILRQVHHKNVVRFIGACTKCPHLCIVTEYMTGGSLYDYLHKNRNVLELSQLLKFSIDVCKGMEYLHGNNIIHRDLKTANLLMDTHNVVKVADFGVARFLIQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLDLMQRCWEAIPSSRPAFNEIRVELENLLLEVENNLEANGA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi292g00004 422 ProSiteProfiles Protein kinase domain profile. 158 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi292g00004 422 PRINTS Tyrosine kinase catalytic domain signature 232 245 IPR001245 GO:0004672|GO:0006468
Vivi292g00004 422 PRINTS Tyrosine kinase catalytic domain signature 315 325 IPR001245 GO:0004672|GO:0006468
Vivi292g00004 422 PRINTS Tyrosine kinase catalytic domain signature 334 356 IPR001245 GO:0004672|GO:0006468
Vivi292g00004 422 PRINTS Tyrosine kinase catalytic domain signature 269 287 IPR001245 GO:0004672|GO:0006468
Vivi292g00004 422 PRINTS Tyrosine kinase catalytic domain signature 377 399 IPR001245 GO:0004672|GO:0006468
Vivi292g00004 422 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 130 414 - -
Vivi292g00004 422 SMART serkin_6 158 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi292g00004 422 Pfam Protein tyrosine and serine/threonine kinase 158 405 IPR001245 GO:0004672|GO:0006468
Vivi292g00004 422 SUPERFAMILY Protein kinase-like (PK-like) 147 411 IPR011009 -
Vivi292g00004 422 ProSiteProfiles ACT domain profile. 57 129 IPR002912 -
Vivi292g00004 422 Gene3D Phosphorylase Kinase; domain 1 145 236 - -
Vivi292g00004 422 Pfam ACT domain 56 103 IPR002912 -
Vivi292g00004 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Vivi292g00004 422 Gene3D Transferase(Phosphotransferase) domain 1 237 420 - -
Vivi292g00004 422 FunFam Serine/threonine-protein kinase isoform 1 148 236 - -
Vivi292g00004 422 SUPERFAMILY ACT-like 56 124 IPR045865 -
Vivi292g00004 422 CDD STKc_MAP3K-like 164 402 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi292g00004 51 413 MAP Kinase Kinase Kinase AT2G17700 57.333 4.12e-155 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vivi292g00004 PK_Tyr_Ser-Thr 5.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi292g00004 - - gmx:100797987 711.835