Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi292g00003 ATGGATTTGCTTGAAGGCGTTGGAGAGAGTTCATCGCCACCGCGCTCCTTCGGCGGTTACAGCCACGATATCAGAACCGACGTTTACAACCGATTGGTGGAAACCGGCCACGACGAAGCCGTATCGAATCCGGATTTTCGTGAACAGCTTGAAGCTCACTTCAATCGCTTGCCTCCAAGTTATGGACTTGATGTTAATGTTGATAGAGCTGAAGATGTTTTAGTTCACCGGAATCTTCTTGATTTGGCAAGAGACCCCGATAAGCGCCCTGTTTACCATATACGCTTATTGGAGAATATTTCTACTAGGACAGATGGCGAAGATCAAGAAATTGTAAGTACTCATACTAGCCCTGAGTTATCTTCTCATACAACAAATGGGGGAGTCGTAGCATCTAATAAGAGAACAAGAGATCTTGCAACTGAGTTTGAGCCTTGCTCAAAGCTTGAGGACCTAAATTTGGATGTTATAAAGAACTCCAAGGAAACAAAAGAAAAATTTGTTACTGACAGCTTTTCTCAGAGGCATGAAAATTCAAGTGTCCCAGTTCATGAAATAATATTTTCTGCTGTTGACAAACCAAAGCTTTTAAGTCAGCTGTCCGCTTTGCTGTCTGATATTGGGCTTAACATCCGTGAAGCACATGTATTTTCTACAACTGATGGCTACTCCCTCGATGTTTTTGTGGTAGATGGATGGCCACTAGAGGAAACCGATGGGTTGTACGCTGCTATGGAAAAAGCTGTAGCAAGGAGTGAGGGGTCATGGTCTCATTCTTCAAATTCTCATTCAGCTGTGGCAAAAGCCTTAGCAGCAGAAGGAAAATCTGGGGACTGGGAAATAGACAGGAGGTCGTTAAAGATAGGAGAAAAAATAGCATCTGGATCATGTGGAGATTTGTATCATGGAGTTTATCTTGGTGAAGATGTAGCTGTTAAGGTTTTGAAATCTGGGCAACTGAATGATGCCTTAGAAGATGAGTTTACGCAAGAAGTAGCAATTTTGAGACAGGTGCATCATAAAAATGTTGTTCGTTTCATTGGTGCATGCACAAAGTGTCCACATTTGTGCATAGTAACAGAGTATATGACTGGGGGAAGTCTGTATGATTACTTGCACAAAAATCGTAATGTCTTGGAGCTGTCTCAATTACTCAAGTTTTCAATTGATGTCTGCAAGGGAATGGAGTATTTGCATGGAAATAACATAATTCACAGGGATCTGAAGACAGCCAATTTGCTGATGGATACTCACAATGTTGTTAAAGTGGCAGATTTTGGAGTTGCTCGGTTCCTTATCCAGGGTGGAGTGATGACTGCAGAGACTGGAACTTATAGATGGATGGCACCAGAGGTCATAAACCACCAGCCTTATGATCAGAAGGCAGATGTATTCAGTTTTTCCATAGTACTATGGGAACTAGTGACAGCAAAGGTACCATATGATACCATGACTCCACTACAAGCTGCTTTGGGTGTGAGACAGGGACTGAGACCAGAACTTCCAAAGCATGGGCACCCTAAACTATTAGATTTGATGCAAAGATGTTGGGAAGCAATTCCAAGCAGTCGTCCAGCCTTCAATGAGATAAGAGTTGAACTTGAAAATCTTTTGCTAGAAGTGGAGAATAATTTAGAAGCTAATGGTGCTTAA 1653 0.4211 MDLLEGVGESSSPPRSFGGYSHDIRTDVYNRLVETGHDEAVSNPDFREQLEAHFNRLPPSYGLDVNVDRAEDVLVHRNLLDLARDPDKRPVYHIRLLENISTRTDGEDQEIVSTHTSPELSSHTTNGGVVASNKRTRDLATEFEPCSKLEDLNLDVIKNSKETKEKFVTDSFSQRHENSSVPVHEIIFSAVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPLEETDGLYAAMEKAVARSEGSWSHSSNSHSAVAKALAAEGKSGDWEIDRRSLKIGEKIASGSCGDLYHGVYLGEDVAVKVLKSGQLNDALEDEFTQEVAILRQVHHKNVVRFIGACTKCPHLCIVTEYMTGGSLYDYLHKNRNVLELSQLLKFSIDVCKGMEYLHGNNIIHRDLKTANLLMDTHNVVKVADFGVARFLIQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLDLMQRCWEAIPSSRPAFNEIRVELENLLLEVENNLEANGA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi292g00003 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Vivi292g00003 550 SUPERFAMILY Protein kinase-like (PK-like) 275 539 IPR011009 -
Vivi292g00003 550 CDD STKc_MAP3K-like 292 530 - -
Vivi292g00003 550 MobiDBLite consensus disorder prediction 113 130 - -
Vivi292g00003 550 FunFam Serine/threonine-protein kinase isoform 1 276 364 - -
Vivi292g00003 550 Pfam Protein tyrosine and serine/threonine kinase 286 533 IPR001245 GO:0004672|GO:0006468
Vivi292g00003 550 ProSiteProfiles ACT domain profile. 185 257 IPR002912 -
Vivi292g00003 550 SUPERFAMILY ACT-like 184 252 IPR045865 -
Vivi292g00003 550 Gene3D Transferase(Phosphotransferase) domain 1 365 548 - -
Vivi292g00003 550 Pfam ACT domain 184 231 IPR002912 -
Vivi292g00003 550 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 185 542 - -
Vivi292g00003 550 SMART serkin_6 286 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi292g00003 550 PRINTS Tyrosine kinase catalytic domain signature 397 415 IPR001245 GO:0004672|GO:0006468
Vivi292g00003 550 PRINTS Tyrosine kinase catalytic domain signature 443 453 IPR001245 GO:0004672|GO:0006468
Vivi292g00003 550 PRINTS Tyrosine kinase catalytic domain signature 360 373 IPR001245 GO:0004672|GO:0006468
Vivi292g00003 550 PRINTS Tyrosine kinase catalytic domain signature 505 527 IPR001245 GO:0004672|GO:0006468
Vivi292g00003 550 PRINTS Tyrosine kinase catalytic domain signature 462 484 IPR001245 GO:0004672|GO:0006468
Vivi292g00003 550 MobiDBLite consensus disorder prediction 105 130 - -
Vivi292g00003 550 ProSiteProfiles Protein kinase domain profile. 286 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi292g00003 550 Gene3D Phosphorylase Kinase; domain 1 273 364 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi292g00003 23 541 MAP Kinase Kinase Kinase AT2G17700 51.128 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vivi292g00003 PK_Tyr_Ser-Thr 1.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi292g00003 - - gmx:100797987 915.605