Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi289g00021 ATGAAGCACCCTGAGGAATTAGGATTTGTAAGGGAAGTAAAACCTGTCTTTGAACATATGCCACCATCGTGTGAAGAATATGTATCAGAGTTTCTTAAAGCTGTAAAAGTTGCTGTAAAAGATGATGATTGTGGTGATTTTATTAAAGTTATGCAAGATTACTATAAAAGAAACATCGATGAAACGTGTCTCCTGGATAGAGTGAAGGTGCTGCTCGGAGGGCATGCGAATTTAATCAGGGAATTCAGCACCTTATTTCTTCCCACTCGAAGGCATATCACGATTCCTCCTTGGGATCAGCTTCCTCGGGATGTGCTTGACGTCATATCCCAAAAACTTGATTTTGACGACCTCTTTCAATTTTCTCGTGTCTGCAAAGATTGGAGACTAGTTTTTCATGAATCAATAGATAAATCAAAATTCTTGACATCCCAGGAACCTCTCCTTCTTGAGTTTTTTAATTATCCTGTTAAGGTACCATATTCCTTTACTAGCCTACCCACTCAAAAAGTTTATCCTTTGAAAAAGATGATGATGAACCACCTATTGAGTTATTCCGATAACTCCTTCCCTATCTATGTTACCTATTCTAGTGGGTATTTCATTATGATTGCTGATAATTCTTCGATTCTGCTCGTCAACCCATTCACACGAATAAAGAAGAAAGTAATCTGTCCATCCACCTTTGAGTTTAGTTCCTCCGCTCAACATACATACCGTGCATTACTTGCTTTTGACAAATGCTCTGAGGAATTTGTTTTATTATTTTTATTCAGACTTTCTAACGGTTTGCATGTCTATCAATCTCGAAATAATGGTTGGGTTACATATTCCACTGAGGATAATGAGGATGCCGTTGTTGACTTTGTGGCTTTGAACAATAAAATATATGTTGTTACTGAGGAGCCCAAGATAGGGGTACTCTCTTTGGATTCACCAAATATTGAATATCTACCGATGGTGAATTCTCCCAACTTAAATATTGTCTTATCATTCTTTAACTTGGTTAAATGTGATGAACAACTTTTACTGGTTCGATTAAATCCAAGTCTCCATCCTATTATTATGCGTGGTAACCCTCCGCCAGAGAGAAAAGTTTACAAGATAGACTTCTCAACCATGACTTATGTAGAACTCGAAACCTTGGGAGACATTGCATTATTTTATGTTGCCTTTAGAAGCTGTAAGGCATTGATCAACCCAAACAAATGGGGATATGAGAGCAACTCCGTGTACGAAGTCTATAATTGTGCCAATAAATGTCCCCGTATCAAAAATCCCTTTTGTACGGTTTATAATTGGGATAAAAAATCAGAGAAATTCATTGCGCCTCCTAATCCTAGAACAGCGGGCAGTGTCTTTGATTGGTGTTTTAGACATCCTGAAATATGA 1392 0.3764 MKHPEELGFVREVKPVFEHMPPSCEEYVSEFLKAVKVAVKDDDCGDFIKVMQDYYKRNIDETCLLDRVKVLLGGHANLIREFSTLFLPTRRHITIPPWDQLPRDVLDVISQKLDFDDLFQFSRVCKDWRLVFHESIDKSKFLTSQEPLLLEFFNYPVKVPYSFTSLPTQKVYPLKKMMMNHLLSYSDNSFPIYVTYSSGYFIMIADNSSILLVNPFTRIKKKVICPSTFEFSSSAQHTYRALLAFDKCSEEFVLLFLFRLSNGLHVYQSRNNGWVTYSTEDNEDAVVDFVALNNKIYVVTEEPKIGVLSLDSPNIEYLPMVNSPNLNIVLSFFNLVKCDEQLLLVRLNPSLHPIIMRGNPPPERKVYKIDFSTMTYVELETLGDIALFYVAFRSCKALINPNKWGYESNSVYEVYNCANKCPRIKNPFCTVYNWDKKSEKFIAPPNPRTAGSVFDWCFRHPEI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi289g00021 463 Pfam F-box domain 98 129 IPR001810 GO:0005515
Vivi289g00021 463 SMART fbox_2 101 140 IPR001810 GO:0005515
Vivi289g00021 463 Pfam Paired amphipathic helix repeat 47 84 IPR003822 GO:0006355
Vivi289g00021 463 Gene3D Paired amphipathic helix 28 88 IPR036600 GO:0006355
Vivi289g00021 463 ProSiteProfiles F-box domain profile. 95 144 IPR001810 GO:0005515
Vivi289g00021 463 PANTHER OS06G0113600 PROTEIN 97 414 - -
Vivi289g00021 463 SUPERFAMILY PAH2 domain 28 86 IPR036600 GO:0006355
Vivi289g00021 463 Gene3D - 98 135 - -
Vivi289g00021 463 SUPERFAMILY F-box domain 91 170 IPR036047 GO:0005515
Vivi289g00021 463 CDD F-box_SF 99 133 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi289g00021 F-box 8.2e-08 CL0271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi289g00021 - - vvo:131628340 957.592