Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi289g00016 ATGGTTTTTCCCAAACCGATTGCTTACATTGAAATTACAACCGAACATTTTGATCTTGCATACAATCATCCATCAGTTCTCCATGAACTTCAAAGAGAATGCAATAAACTATCAATTCCATCACTCCAAACTAGTTTTGGGATTGTACCGAATACACTTTCACAACCTTCAAAAAGAAAATCTTGGAAAAAGAAGAATAATAATACAAAGATATTGGAGTGTCATTTGAGTGTAGAGAAGATCAAAGAAGATCCGTGGACATGGAGAAAATATGGAGAAAAAATCATCAAAGGGTCTTCACATCCAAGGAGCTACTACAAATGTAGCAGCTTCAAAGATTGTCAAGCAAAAAAACTAGTAGAAAAAAGCAAAAACAAAGAGAATACTTATGTTGTGACGTATAAAGGAAAACACAATCATAAAGAGCCAAAATGTAACAACAAATTTGTCACTGGCACCTCCCGAAACAAGTCATCAAAGAGAGTATTATCTACTTCTAAAGCTGTTGAATCATCCTCAAATGTAAGAAGCATGGGTTCACCTAATGTTGTAATGGCACACTTTAATCAGACAGAGAATATCAATGCTCAAATTCTCTCGCCTCAATCAAAAGTCCTATATCCAGAAAATGAGCTTACATCAAATGGTTTGCTTGTTTCCCAAGAAACGGTATCGTCTTCAATTGTTGGAAACTCGGGATCATCTAATGTGATGAAGTTGCAGTTTGATGACCCAAAGAGAGGTGGTGCTCAAGTTTTGACTTGTGAATCAATAATTCCTTGTTCACAAACAAAATCAATTGGAAGTTGTGATGATGATGACCATGAAATTTTGATACCAAACATGAGAGCAATGTCGGAGGATATTTTACTAGACTTCAACCACCTCAATGGTGGTAGGTTATTCTCTTAG 912 0.3575 MVFPKPIAYIEITTEHFDLAYNHPSVLHELQRECNKLSIPSLQTSFGIVPNTLSQPSKRKSWKKKNNNTKILECHLSVEKIKEDPWTWRKYGEKIIKGSSHPRSYYKCSSFKDCQAKKLVEKSKNKENTYVVTYKGKHNHKEPKCNNKFVTGTSRNKSSKRVLSTSKAVESSSNVRSMGSPNVVMAHFNQTENINAQILSPQSKVLYPENELTSNGLLVSQETVSSSIVGNSGSSNVMKLQFDDPKRGGAQVLTCESIIPCSQTKSIGSCDDDDHEILIPNMRAMSEDILLDFNHLNGGRLFS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi289g00016 303 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 44 191 IPR044810 GO:0003700
Vivi289g00016 303 SUPERFAMILY WRKY DNA-binding domain 80 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi289g00016 303 Pfam WRKY DNA -binding domain 83 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi289g00016 303 ProSiteProfiles WRKY domain profile. 77 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi289g00016 303 Gene3D WRKY domain 67 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi289g00016 303 SMART WRKY_cls 82 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi289g00016 63 158 WRKY Transcription Factor Family AT5G52830 47.917 9.95e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi289g00016 WRKY 6.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi289g00016 - - vvo:131628356 606.29