Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi289g00010 ATGCCAACTTCTCAAGAAAAATCAAATTCAGCTGGTAATCATTTATACCAAAACCAGCTTGTGAAACAAACTGATTCATTCAACAGTCATTACAAAATATTACAAACCAATTCGTCATGTCTTGGTAGTAGTAGTAATAGTCATGGAACCAATGTTTCTTATGGAACAAGCAACAAGGAGAAAAAATTCTTTACCTTGGAATCATCTCAACAAAATGCGGATTTCGTAGCTTTTGATTCTCCTTCATCCGCTAGCGTTTCGTCCAATATCAGAAGTCCTTTTTCTCCGCAACTTTCGCGTCATTACGCCTCTGACAACAACTCGCCGATAAGTGCTTACTCTAGTGCTGCTGTCGATGATGATAGCTCTGAGTTGAAAAAGAAACTCAGAGAATTGGAGATTTCGTTGTTAGGTCCCGAGTCGGATATTGTCAACAGCTGTCAGAGCTTCTCGAATGGTGCTTCTCGATATAATTGGGCTGTGATTCAAGAAATGATTCCGAAGTTGGATTTAAAGGAAATACTAATTATATGCGCGCAGGCTGTTTCGGATGATGATATTGAAACTGCATTGGGATTCATGAACAATGTGTTGGGAAAGATGGTTTCGGTCTACGGTGAACCGAATCAAAGATTAGGTGCTTACATGTTAGAAGGCTTAAGAGCGAGGTTGGAATCATCGGGGAGTGTGATTTATAAATCGTTGAAGTGCGAAGAACCAACGAGCAAAGAATTGATGAGTTATATGCATGTATTCTATCAGGTTTGCCCTTATTGGAAGTTTGCTTACTTATCTTCCAATGTTGCCATTTGCGAGGCGATGCAAAATGAGTCAAGAATTCACATAATCGACTTCCAAATCGCGCAGGGTACACAGTGGATGTCACTCATGGAGGCTCTCTCGCGTAGACCGGGCAGGCCTCCTTTTATTCGTGTAACAGGCATCGATGATTCTCTATCGCTTCACGCTAGAGGCGGAGGACTTCATATCGTAGGAGAAAAGCTAAGGGATTACGCTAAAACTTGTGGCATTCCGTTTGAGTTCAATAGTGTTGCTATGTTCGGATGCGAGGTTCAGCTAAAAGATTTCGTACTTCAAAATGGCGAAGCGCTGGCTGTGAATTTTCCTTTTAGTTTGCATCACATGCCGGACGAGAGCGTGAGCACGGAGAATCATAGAGACCGGCTTTTGAGATTGGTTAAGAGTTTGTCGCCTAAGGTAGTGTTACTTGTGGAGCAAGAATCAAACACAAACACTTCAACATTTTTTCAAAGGTTTGTTGAGACTATGAATTATTATTCTGCTATATTTGAATCAATTGATGTGGCTCTCCCTAGAGATGATAAGACAAGGATCAGCCTAGAACAGCACTGCATCGCACGAGATATCGTTAACATGATAGCTTGTGAGGGGGGTGAGAGAGTGGAGAGACATGAGCTGTTTGGAAAGTGGAAGGCAAGATTATCAATGGCGGGTTTTGTGCCGTTACCGTTGAGTCCATCGGTGACGGCTTCGGTTACAAATCTGTTGAGGGAGTTCAATGAGAATTATAGGATTGAACAAACGGATGTTGCTCTCTATTTAGCATGGAAGAGTAGAGCTTTGGCCACATTTTCTGCTTGGAAACCCAAGCTAGGTGAGGATTCTTCACTCATAATAGAGAAATCGTGA 1671 0.4201 MPTSQEKSNSAGNHLYQNQLVKQTDSFNSHYKILQTNSSCLGSSSNSHGTNVSYGTSNKEKKFFTLESSQQNADFVAFDSPSSASVSSNIRSPFSPQLSRHYASDNNSPISAYSSAAVDDDSSELKKKLRELEISLLGPESDIVNSCQSFSNGASRYNWAVIQEMIPKLDLKEILIICAQAVSDDDIETALGFMNNVLGKMVSVYGEPNQRLGAYMLEGLRARLESSGSVIYKSLKCEEPTSKELMSYMHVFYQVCPYWKFAYLSSNVAICEAMQNESRIHIIDFQIAQGTQWMSLMEALSRRPGRPPFIRVTGIDDSLSLHARGGGLHIVGEKLRDYAKTCGIPFEFNSVAMFGCEVQLKDFVLQNGEALAVNFPFSLHHMPDESVSTENHRDRLLRLVKSLSPKVVLLVEQESNTNTSTFFQRFVETMNYYSAIFESIDVALPRDDKTRISLEQHCIARDIVNMIACEGGERVERHELFGKWKARLSMAGFVPLPLSPSVTASVTNLLREFNENYRIEQTDVALYLAWKSRALATFSAWKPKLGEDSSLIIEKS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi289g00010 556 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 109 541 IPR005202 -
Vivi289g00010 556 ProSiteProfiles GRAS family profile. 162 542 IPR005202 -
Vivi289g00010 556 Pfam GRAS domain family 172 542 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi289g00010 60 543 GRAS Transcription Factor Family AT4G17230 57.606 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi289g00010 GRAS 1.9e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi289g00010 - - gmx:100817987 703.745