Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi286g00022 ATGGCACATCGAAGAGCGAAATTTCTGTTCCTTCTATGCGCTCTTTGTTATGCACTCAATTCCTTTGCCGCAAAGAGCTATTACGATATACTGCAAGTGTCGAATAGTGCGGAGGATGATCAGATTAAGAGAGTGTATAGGAAACTGGCATTGAAGTATCATCCTGATAAGAATCCGTGGAATGAAGAAGCTAATAAGAAATTCGCGGAGATTAACAATGCATATGAAGTGTTGTCCGATAGCGAGAAGAGATATATTTATGATAAGTTCGGTGAAGAGGGTTTGAAGCAGCATGCGGCTGGTGGAGGAAGAGGTGGTGGGATGAACATGCAGGATATTTTTAACTCGACAGGGAAGCTTCGAGAATCCATGTCGAGGAACTTCTGCTGTATTCCCACGAGGAACTTCTGCTGTATCATACACCGAGTTAAACTTTTTCTGAGGACTAGATACAAGATACGCGCAGCCTTATTCATGTTTCTTGGGCTTCCTGTTGAGTTTGAAGTTGAGATCCCGGGGCGTGTTCCCAGTGCTAGGTTTTTTGGATTACTGGTGCCAGCCGTGGAATTGGGGAAGTTCTAG 582 0.4416 MAHRRAKFLFLLCALCYALNSFAAKSYYDILQVSNSAEDDQIKRVYRKLALKYHPDKNPWNEEANKKFAEINNAYEVLSDSEKRYIYDKFGEEGLKQHAAGGGRGGGMNMQDIFNSTGKLRESMSRNFCCIPTRNFCCIIHRVKLFLRTRYKIRAALFMFLGLPVEFEVEIPGRVPSARFFGLLVPAVELGKF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi286g00022 193 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Vivi286g00022 193 SUPERFAMILY Chaperone J-domain 21 120 IPR036869 -
Vivi286g00022 193 CDD DnaJ 27 80 IPR001623 -
Vivi286g00022 193 PRINTS DnaJ domain signature 63 83 IPR001623 -
Vivi286g00022 193 PRINTS DnaJ domain signature 46 61 IPR001623 -
Vivi286g00022 193 PRINTS DnaJ domain signature 28 46 IPR001623 -
Vivi286g00022 193 PRINTS DnaJ domain signature 83 102 IPR001623 -
Vivi286g00022 193 Pfam DnaJ domain 27 88 IPR001623 -
Vivi286g00022 193 Coils Coil 61 81 - -
Vivi286g00022 193 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 25 117 IPR044713 GO:0006457|GO:0030544
Vivi286g00022 193 SMART dnaj_3 25 83 IPR001623 -
Vivi286g00022 193 Gene3D DnaJ domain 23 128 IPR036869 -
Vivi286g00022 193 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi286g00022 25 88 C2H2 Transcription Factor Family AT1G74250 40.580 6.33e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi286g00022 K09517 - gmx:100799701 179.489