Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi286g00015 ATGGTTAGGAAGAGGAGAACTGATGGACCTGGTGGTGAAAGCTCTGATGGTCAACACCCTGCTGAGAGGAGTGCTCCACCTCAACAACAGGCTGCTGTATCTGGAGGTGCAGGACCCCAGGGAGGGGGAGGGCCCCAAGGAGGGCGAGGCTGGGCTCCCCAAGGTGGACGTGGGGGTTATGGAGGTGGACGCGGTGGTCGTGGGATGCCCCAACAGCAATATGGTGCTCCCCCTGAGTATCAAGGAAGAGGTAGGGGAGGACATCCCCAGTCCCAACAGCAATATGGTGCTCCCACTGATTATCAAGGAAGGGGTAGGGGAGGACCTCCTCAGCCTCAACAACAGTATGGTGGACCACCTGAATATCAAGGCAGAGGCAGGGGAGGACCTTCTCAGCAAGGAGGTCGTGGATATGGCGGTGGCCGAGGTGGATATGGTGGTGGTGTGGGCCCTGGTGGTGGCCATGACACAGTTTCTTCTTATGGAGGCCCACCTAGGCCACCAGCACCCGAGCTGCACCAAGCTACCTCAGTTCCTTCCGTGTCATATCCAGTTGCGGTGTCTCCTCCGCCTGCACCGAGTGAGGCAAGTTCATCTTCTCATCCACCAGAAGTGTCTGAAGTGGAGCAGGATCTGGGACAGATGACAATTCATTCTGAAGAGACTCCGGCTCCTCCTCCTGCAAGTAAATCATCACTGAGGTTTCCCCTTCGACCTGGAAAAGGGAGCTATGGCAAGAAATGTGTTGTTAAGGCGAACCACTTCTTTGCTGAGTTACCAAAGAAAGACCTGCATCAGTATGATGTGACAATTACTCCTGAAGTGACTTCTAGAGGTGTGAACCGCGCTGTTATGGAGCAGCTTGTGAGATTGTATCGGGATTCTCACCTGGGAAAGAGACTTCCGGCTTATGATGGCCGTAAGAGCCTCTATACTGCAGGGCCACTTCCCTTTATTTCAAAGGACTTTAGAATCACCTTGGTTGATGAAGATGATGGGTCAGGAGGGCAGAGGAGGGACAGGGAGTTTAAAGTTGTTATTAAACTTGCTGCACGTGCTGACCTTCACCACTTGGGTCTCTTTTTGGCGGGGAGGCAAACTGATGCACCTCAGGAAGCTCTACAGGTTCTTGACATTGTTCTCCGGGAGCTTCCTACTACCAGGTATTGTCCAGTGGGAAGGTCATTTTATTCCCCTGATCTAGGTAGAAGGCAGCCTTTAGGCGAGGGGTTGGAAAGTTGGCGAGGATTTTATCAAAGTATTCGTCCTACTCAAATGGGACTGTCTCTGAACATTGATATGTCTTCAACTGCATTTATTGAGCCACTGCCTGTGATTGAGTTCGTTGCCCAGTTGCTGAATAGGGAAGTCTCATCCAGGCCTCTGTCTGATGCTGATCGTGTTAAGATTAAAAAAGCTCTCCGTGGTATCAAAGTTGAAGTAACACATCGTGGCAACATGAGGAGAAAATATCGTATTTCTGGTTTGACATCACAAGCTACCAGAGAGCTGACATTCCCTGTGGATGAGAGGGGTACTATGAAGTCTGTTGTTGAATATTTCCTCGAGACATATGGTTTTGTCATTCAACATACTCAATGGCCTTGTTTGCAAGTGGGCAACACTCAGAGACCAAACTACCTTCCAATGGAGGTCTGTAAGATTGTCGAGGGGCAAAGGTACTCGAAACGATTGAATGAGCGACAAATTACTGCCCTGCTCAAAGTCACGTGCCAACGTCCACTAGATAGGGAACGTGACATCATGCAGACAGTACATCATAATGCCTACCATGAAGATCCTTATGCTAAAGAATTTGGAATCAAAATCAGTGAAAAGCTTGCTCAAGTCGAAGCTCGCATCCTTCCTGCGCCTTGGCTCAAATATCATGATACTGGTAGAGAGAAGGATTGTCTACCCCAAGTTGGCCAATGGAATATGATGAATAAGAAAATGGTCAATGGGGGAACAGTTACCAATTGGTTCTGTGTAAACTTTTCTAGGAATGTGCAAGACAGTGTTGCACGTGGCTTTTGTCAAGAACTTGCCCATATGTGTTATGTATCTGGCATGGCATTTAATCCTGAACCAGTAGTTCCTCCAGTAAGTGCTCGTCCTGATCAAGTTGAGAAGGTTCTGAAAACGCGTCATCATGATGCCAAGACCAAGCTGCAAGGGAAGGATCTCGACCTGCTCATTGTCATTTTGCCTGATAATAATGGTTCTCTTTATGGTGACCTCAAGCGAATATGTGAGACTGATCTGGGGGTTGTTTCACAGTGTTGTTTGACTAAACATGTTTTTAAGATGAGCAAGCAGTACCTTGCAAATGTTTCCTTGAAAATAAATGTTAAGGTTGGGGGTAGGAATACTGTTCTAGTTGATGCACTTTCACGCCGCATTCCACTAGTCAGCGACAGACCTACTATTATATTTGGAGCTGATGTGACTCATCCACACCCTGGTGAAGATTCAAGTCCATCAATAGCAGCTGTTGTTGCTTCTCAAGATTGGCCAGAAATCACCAAGTATGCTGGTTTGGTTTGTGCCCAAGCACATCGGCAGGAATTGATTCAAGACCTTTTCAAACAATGGCAAGATCCAGTCAGAGGAACATTGACTGGTGGAATGGTCAAGGAACTTCTTATATCATTCCGGAGAGCAACTGGTCAAAAACCACAGCGCATCATATTTTACAGAGATGGAGTTAGTGAAGGGCAGTTTTACCAAGTCCTGCTATTTGAGCTTGATGCAATCCGGAAGGCTTGTGCTTCACTTGAACCCAATTATCAGCCTCCTGTGACTTTTGTGGTGGTTCAAAAACGTCATCATACTAGGCTCTTTGCAAGTAACCACCATGACAAGAGTTCAGTTGATCGTAGTGGCAATATATTACCTGGAACTGTTGTGGATTCTAAGATCTGCCATCCAACAGAGTTTGACTTCTACCTTTGCAGTCATGCCGGGATACAGGGTACTAGCCGTCCAGCTCATTATCACGTTTTGTGGGATGAAAATAATTTTACTGCGGATGCTTTGCAAACTTTAACTAACAACTTGTGCTACACATATGCCAGATGCACCCGTTCTGTTTCAATTGTGCCCCCTGCTTATTATGCTCATTTGGCTGCATTCCGGGCAAGGTTCTATATGGAACCTGAGACTTCTGATAGCGGATCTATGACAAGCGGAGCGGTTCCTCGTGGTGGAATGGCAGCTGCTGCTGGGCGTAGTTCACGTGCACCAGGTGCAAATGCTGCTGTCCGACCCCTGCCTGCATTGAAGGAGAATGTCAAGAGGGTCATGTTTTATTGCTGA 3318 0.4762 MVRKRRTDGPGGESSDGQHPAERSAPPQQQAAVSGGAGPQGGGGPQGGRGWAPQGGRGGYGGGRGGRGMPQQQYGAPPEYQGRGRGGHPQSQQQYGAPTDYQGRGRGGPPQPQQQYGGPPEYQGRGRGGPSQQGGRGYGGGRGGYGGGVGPGGGHDTVSSYGGPPRPPAPELHQATSVPSVSYPVAVSPPPAPSEASSSSHPPEVSEVEQDLGQMTIHSEETPAPPPASKSSLRFPLRPGKGSYGKKCVVKANHFFAELPKKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRDSHLGKRLPAYDGRKSLYTAGPLPFISKDFRITLVDEDDGSGGQRRDREFKVVIKLAARADLHHLGLFLAGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQLLNREVSSRPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFLETYGFVIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPLDRERDIMQTVHHNAYHEDPYAKEFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVTNWFCVNFSRNVQDSVARGFCQELAHMCYVSGMAFNPEPVVPPVSARPDQVEKVLKTRHHDAKTKLQGKDLDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMSKQYLANVSLKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTLTGGMVKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVPRGGMAAAAGRSSRAPGANAAVRPLPALKENVKRVMFYC 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi286g00015 1105 Gene3D - 621 794 - -
Vivi286g00015 1105 FunFam Argonaute 10 621 794 - -
Vivi286g00015 1105 ProSiteProfiles PAZ domain profile. 443 557 IPR003100 GO:0005515
Vivi286g00015 1105 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 223 1053 - -
Vivi286g00015 1105 Gene3D paz domain 436 561 - -
Vivi286g00015 1105 SMART Piwi_a_2 731 1052 IPR003165 GO:0003676
Vivi286g00015 1105 FunFam Protein argonaute-2 436 562 - -
Vivi286g00015 1105 CDD Piwi_ago-like 601 1051 IPR045246 -
Vivi286g00015 1105 SUPERFAMILY PAZ domain 249 594 IPR036085 GO:0005515
Vivi286g00015 1105 Pfam Mid domain of argonaute 640 715 IPR032473 -
Vivi286g00015 1105 SMART PAZ_2_a_3 447 579 IPR003100 GO:0005515
Vivi286g00015 1105 MobiDBLite consensus disorder prediction 1 210 - -
Vivi286g00015 1105 ProSiteProfiles Piwi domain profile. 731 1052 IPR003165 GO:0003676
Vivi286g00015 1105 CDD PAZ_argonaute_like 442 556 - -
Vivi286g00015 1105 MobiDBLite consensus disorder prediction 218 237 - -
Vivi286g00015 1105 MobiDBLite consensus disorder prediction 21 35 - -
Vivi286g00015 1105 Gene3D - 800 1105 IPR036397 GO:0003676
Vivi286g00015 1105 Pfam Glycine-rich region of argonaut 117 223 IPR024357 -
Vivi286g00015 1105 Pfam PAZ domain 448 572 IPR003100 GO:0005515
Vivi286g00015 1105 Pfam Piwi domain 732 1051 IPR003165 GO:0003676
Vivi286g00015 1105 Pfam N-terminal domain of argonaute 246 381 IPR032474 -
Vivi286g00015 1105 FunFam protein argonaute 10-like 800 1105 - -
Vivi286g00015 1105 Pfam Argonaute linker 2 domain 583 629 IPR032472 -
Vivi286g00015 1105 SUPERFAMILY Ribonuclease H-like 722 1052 IPR012337 -
Vivi286g00015 1105 Pfam Argonaute linker 1 domain 391 441 IPR014811 -
Vivi286g00015 1105 SMART DUF1785_2 390 442 IPR014811 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi286g00015 121 1105 Eukaryotic Initiation Factors Gene Family AT1G48410 80.525 0.0 1620