Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi286g00014 ATGTCACCAGTTGGATTACCACCAGGTTTCAGGTTTCATCCAACTGATGAAGAACTTGTCAATTATTATCTAAAGAGAAAAATCAGTGGTCAAGAAATTGAACTTGATATCATTCCTGAAGTTGATCTTTATAAATGTGAACCTTGGGAATTAGCAGAGAAATCATTTTTGCCAAGTAGAGATCCAGAGTGGTATTTTTTTGGACCAAGGGACAGAAAATACCCTAATGGATTCAGAACAAATAGAGCAACAAGAGCAGGTTACTGGAAATCAACTGGAAAAGACAGAAGAGTTTCATGCCAAAATAGACCTATTGGTATGAAGAAGACTTTGGTTTACTATAGAGGTAGAGCTCCTCAAGGAATTAGAACTGATTGGGTTATGCATGAGTATCGTCTCGACGATAAAGAGTGCGAGGACAACTCTGGATTACAGGATACTTATGCATTGTGTCGTGTGTTCAAGAAAAATGGAATTTGTTCTGATATGGAAGAGCAACAAGCACAAGCGCAATGTAACATGTCGCTAATAGAATGCTCCCAAACCATAATCAATGAGTGCGAAACAATGTCTCCTGACATACTTGGTGCATCATCTTCATGCTTAGAAGAGGAAGACAAAGATGATTCGTGGATGCAGTTCATTACAGAAGATGCATGGTATTCTTCTAATGCAGGAATGGTTGGTGGTGAAGAAGTTTCACATGTTACATTTACAAACTAA 723 0.3817 MSPVGLPPGFRFHPTDEELVNYYLKRKISGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDNSGLQDTYALCRVFKKNGICSDMEEQQAQAQCNMSLIECSQTIINECETMSPDILGASSSCLEEEDKDDSWMQFITEDAWYSSNAGMVGGEEVSHVTFTN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi286g00014 240 FunFam Nac domain-containing protein 86 15 159 - -
Vivi286g00014 240 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Vivi286g00014 240 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Vivi286g00014 240 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 190 - -
Vivi286g00014 240 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Vivi286g00014 240 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi286g00014 1 231 NAC Transcription Factor Family AT3G17730 75.207 1.18e-131 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi286g00014 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi286g00014 - - gmx:100788036 478.789