Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi286g00008 ATGGAGTATCATAGTGGAGGAAGTGGGTCCCCTGGTGATCATCATCATCATCACCATGATGGTTCTTCTGAATCTCAGAGGAGGAAGAAACGTTACCACCGTCACACTGCTAATCAGATTCAAAGGCTTGAATCGATGTTCAAGGATTGTCCACATCCTGATGAAAAACAAAGGCTGCAGTTAAGCAGAGAATTAGCCTTGGCTCCTAGACAGATCAAGTTTTGGTTTCAGAACAGAAGGACTCAGATGAAGGCACAACATGAAAGAGGTGAAAATTGTTCACTAAGGGCAGAGAATGATAAAATAAGATGTGAGAATATAGCTATAAGGGAAGCCCTTAAAAATGTCATCTGCCCCTCCTGTGGTGGTCCTCCAATCAATGATGAATGTTACTTTGATGAACAAAAGTTGAGAATTGAAAATGCTCAACTCAAAGAGGAGCTTGATAGAGTATCTAGCATTGCTGCAAAGTACATTGGAAGACCAATTTCACAGCTTCCACCAGTTTCACCAATGCACATGTCATCATTGGATTTATCAATGGGAAATTTTGGTGGACAAGGAATGGTTGGAGGACCTTCACTTGATCTTGATCTTCTACCAGGAAGTTCATCAAACATGCCAATGGTTCCTTACCAACCTGCTTGTCTTTCTGATCTCGAAAAGTCGCACATGTCTGACCTTGCTACAAGTGCCATGGGGGAACTGGTTAGGCTTTTGCAGACTGATGATCCTCTGTGGATGAAATCTAACACTGATGGAAAAGATGTTCTTAACCTTGATGCCTATGCTATGATGTTCGATAAGACTGGTAATCGGTTGAAGAATCCGAATATTCGGATTGAAGCTTCTAGGGATTCTGGTGTTGTTATCATGAATAGTTTAACTCTGGTGGAAATGTTTATGGATCCGAACAAATGGATGGAGCTATTTCCTACTATTGTGACAATGGCGAAGACAATCGAAAACATTGTTCCTGGAATGATGGGTGGATATAGTGGTTCTTTGCAAGTGATGTATGAAGAGTTGCAAGTGCTTTCACCATTTGTTCCTATTAGAGAATTCTACTTTCTGCGTCACTGTCAACAAATTGAGCAAGGTTTATGGGCTATAGTTGATGTTTCATATGATTTTCCTAATGACAACCAATTTGGTTCACAATTTCGATGCCATCGTCTTCCGTCCGGTTGCTTCATTCAAGACATGCCTAATGGATATTCCAAGGTTACTTGGGTTGAACATGTTGAGATTGAAGATAAAAATGCAGTTCATAGGCTTTATAGAAATGTTATCCATAGTGGTGTTGCATTTGGTGCTGAAAGATGGCTCACCACTCTTCAAAGAATGTGTGAAAGGCTTGCTTGTCTCATGGTGTCTGCCAATTCTACCCGCGATCTCGGAGGAGTGATTCCATCACCTGAGGGAAAAAGGAGCATGATGAAACTGGCACAAAGGATGGTAACAAATTTCTGTGCAAGTATAAGTGCATCAGCAAGTCACAGATGGACCACACTTTCAGCTGTGAATGAGATTGGAGTCAGAGTTACTGTTAGAAAGAGTACAGATCCTGGTCAGCCTAATGGTATTGTGCTAAGTGCAGCTACTACCATTTGGTTACCTCTTCCTCCACAACATGTTTTCAATTTCTTCAAAGATGAAAGGAAAAGATCTCAGTGGGATGTTCTTTCCAATGGTAATGCTGTTCAAGAAGTTGCTCATATAGCAAATGGTTCACACCCCGGTAACTGCATTTCTGTTCTCAGGGCTTTTAACACAAGTCAGAACAACATGCTGATACTTCAAGAAAGCTGTGTGGACTCATCAGGTTCACTAGTAGTCTATTGTCCGGTCGATTTACCAGCTATCAACATAGCAATGAGCGGCGAAGACCCGTCCTACATTCCATTACTCCCGTCCGGTTTCACAATTACATCTGACGGAAACCAAAGCGACAACTCCACAATCAACAATAATAATAGTAATAATGGTAATAATAATGGCGACGGAGCATCAACAAGCACAGTCACAAACATAGGAAATAATAGCGGAGGATCATTGATAACAGTTGCATTTCAAATAATGGTAAGCAGTTTACCATCTGCAAAACTTAACATGGAGTCTGTTGCAACTGTGAATGGACTTATTAGTGAGACAGTCCAACACATAAAAGCTGCTTTGAATTGCCCTAGTTCTTGA 2196 0.4107 MEYHSGGSGSPGDHHHHHHDGSSESQRRKKRYHRHTANQIQRLESMFKDCPHPDEKQRLQLSRELALAPRQIKFWFQNRRTQMKAQHERGENCSLRAENDKIRCENIAIREALKNVICPSCGGPPINDECYFDEQKLRIENAQLKEELDRVSSIAAKYIGRPISQLPPVSPMHMSSLDLSMGNFGGQGMVGGPSLDLDLLPGSSSNMPMVPYQPACLSDLEKSHMSDLATSAMGELVRLLQTDDPLWMKSNTDGKDVLNLDAYAMMFDKTGNRLKNPNIRIEASRDSGVVIMNSLTLVEMFMDPNKWMELFPTIVTMAKTIENIVPGMMGGYSGSLQVMYEELQVLSPFVPIREFYFLRHCQQIEQGLWAIVDVSYDFPNDNQFGSQFRCHRLPSGCFIQDMPNGYSKVTWVEHVEIEDKNAVHRLYRNVIHSGVAFGAERWLTTLQRMCERLACLMVSANSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASISASASHRWTTLSAVNEIGVRVTVRKSTDPGQPNGIVLSAATTIWLPLPPQHVFNFFKDERKRSQWDVLSNGNAVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCVDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTITSDGNQSDNSTINNNNSNNGNNNGDGASTSTVTNIGNNSGGSLITVAFQIMVSSLPSAKLNMESVATVNGLISETVQHIKAALNCPSS 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi286g00008 731 MobiDBLite consensus disorder prediction 645 674 - -
Vivi286g00008 731 FunFam Homeobox-leucine zipper protein GLABRA 2 227 451 - -
Vivi286g00008 731 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 26 727 IPR042160 -
Vivi286g00008 731 SMART START_1 227 452 IPR002913 GO:0008289
Vivi286g00008 731 CDD homeodomain 28 87 IPR001356 GO:0003677
Vivi286g00008 731 Pfam Homeodomain 29 84 IPR001356 GO:0003677
Vivi286g00008 731 ProSiteProfiles START domain profile. 218 455 IPR002913 GO:0008289
Vivi286g00008 731 FunFam Homeobox-leucine zipper protein HDG1 15 102 - -
Vivi286g00008 731 Gene3D - 13 100 - -
Vivi286g00008 731 SUPERFAMILY Bet v1-like 473 723 - -
Vivi286g00008 731 MobiDBLite consensus disorder prediction 21 36 - -
Vivi286g00008 731 ProSitePatterns 'Homeobox' domain signature. 61 84 IPR017970 GO:0000981|GO:0006355
Vivi286g00008 731 MobiDBLite consensus disorder prediction 1 36 - -
Vivi286g00008 731 ProSiteProfiles 'Homeobox' domain profile. 26 86 IPR001356 GO:0003677
Vivi286g00008 731 Pfam START domain 229 452 IPR002913 GO:0008289
Vivi286g00008 731 Gene3D - 232 452 IPR023393 -
Vivi286g00008 731 SUPERFAMILY Bet v1-like 219 453 - -
Vivi286g00008 731 SUPERFAMILY Homeodomain-like 6 86 IPR009057 -
Vivi286g00008 731 Coils Coil 134 154 - -
Vivi286g00008 731 CDD START_ArGLABRA2_like 222 451 - -
Vivi286g00008 731 SMART HOX_1 27 90 IPR001356 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi286g00008 24 731 Homeobox Transcription Factor Family AT1G73360 64.714 0.0 913
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Vivi286g00008 START 5.8e-49 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi286g00008 K09338 - gmx:100809075 1177.16