Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi286g00003 ATGAATCGATTTGATAAAGACGAAGTTCCGATTCTGTTAGAATCACGTGCACAACGATCTGATGAACCTGTGGAGTCTAATTTACGAAGGAACATATCAAGGACACGAAGTGCTTCAATCTCTATTTCTATGGCTGCGTCGGATCCATATGAGAGACAACCATATCTTGTTGGACATACTGGTCCGCTTCGTTCTGCAAGGAAAACTCCGGTCAGCCAAATGAGTGGACCACTATATCCTACTCCTGCAACTGGTAATCCTTTTCAGAATAGTATAGTAGTGGCGGGAAACAGAGTAGGAGAGAACAAAACAGAGAAGTTTGATGACAATGATGAAAATCATTGGAATAATAAATACGACAGAAAAAATGAACATTTAGTGAGGTCTGGACAACTCGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACTTACTTCAAAGTTGCTCAGAAAAGAAAACCACGAGCTTCCACTATATTTGATCCTAAGTTCCACAATAGTCTTTATGGCGATGCCAAAGGTTTTGGAAGAAAACTTTTTTCTTTCTGCTTTTCATGCATTCCTGGAGTTATGAACCCTCACACTAAAGTTGTACAACAATGGAACAAATTTTTGGCCATATTTTGCTTGGTTGCAATTTTTGTTGATCCGTTATTTTTCTTCTTAATCTATGTGAGCGAGGAAACTAAATGTATTAAGATCAACTGGACAATGGCAACAACACTCGTTGTACTTAGAAGCATAACTGATCTGGTGTATTTATTGAACATTCTTCTCCAATTTAGGTTGGCTTATGTTTCTCCCGAGTCTAGGGTGGTTGGTGCTGGAGATTTAATTGACCATCCGACGAAAATCGCTCTTCATTACTTTAAGGGTTATTTTTTCTTCGACTTATTTGTTGTATCACCTCTTCCTCAGGTAATGATATTGTTTATCCTACCAGATTCCTTGGGGTCATCAGGAGCAAATTATTTTAAAAATCTTCTACGTCTAGCGATTCTTGTACAATATATTCCCCGATTGTTCAGATTTCTGCCTCTGCTAATTGGCCAGTCTCCAACCGGATTCATCTTTGAGTCTGCATGGGCAAATTTCATTTTAAATCTTCTCATTTTTATGCTATCAGGCCATGTTGTTGGGTCATGCTGGTACCTCTTTGGTCTACAGAGGGTTAACCAATGTTTGCGAGATGCCTGCCATCTTGCTAAGCTATCTGGATGCATGGATTTGATTGATTGTAATTCTAAGGCGGAGAGTTTATCAACTAAATGGTCTAATGATACGGGTGCCAAAGCTTGTTTGAATTCCTCATCTGATGCATTTCCTTATGGAATTTATGCCAGTGCTGTACCACTTACAATAGAAACCAGGGTGATCAACAAATATGTGTATGCACTGTTTTGGGGATTCCAGCAAATCAGTACTCTGGCGGGTAATCAAACCCCAAGCTATTTTGTGTGGGAAGTCCTCTTTACAATGTCCATCATTGGATTGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAACATCCAGAACTTTCTTCAAGCACTTGGACGGAGGAGGTTGGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGTCATCGCCGCTTGCCGGAAGATCTCAAAAGGAGAGTTCGACAGGCTGAACGGTATAGTTGGGCTGCAACAAGAGGTGTTCCTGAGAAAATGGTTTTGGAGAATTTGCCAGAAGATCTCGTGACAGACATACGGCGTCATCTCTTCAAATTTGTCAACAAAGTTCGTATTTTTTCCCTGATGGATGAGGATGAGCCTATCTTGGATGCCATTCGTGAGCGACTAGTACAAACGACCTACATCAAAGGAAGTAAAATTTTAAGTCAGGGCGGTCTAGTGCAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGAAGATGGAATTCCGGTTCCGTTAACCGAAGGGGATGCTTGCGGTGAAGAACTTTTAAGATGGTATCTTGAACAATCTTCTGAAAGCAAAGAAGGTAAAAAAGTAAAGTTTCACGGACAAGGGTTGACTAGTGACAGAACGGTAAGATGCTTGACTAATGTTGAGGCATTTTCACTCCGCTCTAAAGACATTGAAGAAGTCACAACTCTTTTTGCAAGATTCTTGCGGAGTCCTCGTGTTCAAGGAGTCATAAGGTATGAATCGCCTTATTGGAGATCGCTTGCAGCAAACAGAATTCAGGTGGCATGGAGATACAGGAAAAAGCGTCTAAGTCGAGCTAATACCACACATTGA 2286 0.4086 MNRFDKDEVPILLESRAQRSDEPVESNLRRNISRTRSASISISMAASDPYERQPYLVGHTGPLRSARKTPVSQMSGPLYPTPATGNPFQNSIVVAGNRVGENKTEKFDDNDENHWNNKYDRKNEHLVRSGQLGMCNDPYCTTCPTYFKVAQKRKPRASTIFDPKFHNSLYGDAKGFGRKLFSFCFSCIPGVMNPHTKVVQQWNKFLAIFCLVAIFVDPLFFFLIYVSEETKCIKINWTMATTLVVLRSITDLVYLLNILLQFRLAYVSPESRVVGAGDLIDHPTKIALHYFKGYFFFDLFVVSPLPQVMILFILPDSLGSSGANYFKNLLRLAILVQYIPRLFRFLPLLIGQSPTGFIFESAWANFILNLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHLAKLSGCMDLIDCNSKAESLSTKWSNDTGAKACLNSSSDAFPYGIYASAVPLTIETRVINKYVYALFWGFQQISTLAGNQTPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLKRRVRQAERYSWAATRGVPEKMVLENLPEDLVTDIRRHLFKFVNKVRIFSLMDEDEPILDAIRERLVQTTYIKGSKILSQGGLVQKMVFIVRGKLESIGEDGIPVPLTEGDACGEELLRWYLEQSSESKEGKKVKFHGQGLTSDRTVRCLTNVEAFSLRSKDIEEVTTLFARFLRSPRVQGVIRYESPYWRSLAANRIQVAWRYRKKRLSRANTTH 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi286g00003 761 SUPERFAMILY Voltage-gated potassium channels 194 521 - -
Vivi286g00003 761 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 135 756 - -
Vivi286g00003 761 Gene3D - 204 518 - -
Vivi286g00003 761 Gene3D Jelly Rolls 591 717 IPR014710 -
Vivi286g00003 761 ProSiteProfiles cAMP/cGMP binding motif profile. 595 663 IPR000595 -
Vivi286g00003 761 Pfam Ion transport protein 204 521 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi286g00003 761 SUPERFAMILY cAMP-binding domain-like 521 714 IPR018490 -
Vivi286g00003 761 Gene3D Helix hairpin bin 520 585 - -
Vivi286g00003 761 CDD CAP_ED 593 711 IPR000595 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi286g00003 5 671 Ion Channels AT3G17700 58.590 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi286g00003 K05391 - ccaj:109789004 1144.03