Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi286g00002 ATGAATCATTTCGATTATGACGAAGTTCCGATTATGTTTGAAGCATGTTCGCAGCGATCTGATGAGCCTGAGGATTCTTCATTTCGAAGGAACATATCGAGGACACCAAGTGCTTCAATCTCTATTTCCATGGCTTACTTGGATCAATCCGAGACACAATCGAAACTTGCAAGGAAAACTCCGATCGACCAGATGAGTGGTCCACTATATGCAACTGGAAATCCTTTTCAGAATAGTTTAGTGAAGGCAGGGAATAGGAAAGATGGATATCGTTGGGATAACGACTATGGCAGAAAAAATGAACACTTGTTGATGTCTGGACCACTCGGAATGTGTAATGATCCTTATTGCACTACTTGCCCGACTTACATCAAAGTTTCTCAGCAAAGAAAACCTATAGCTTCAATTATCTTTGATCCCAAGTTCCACAATTCTCTTTATGGCGACTTCAAAGGTTTTGGAAGAAAACTTCTTTCTTTATGCTCTCCATGTATTCCTGGAGTTATGAATCCTCACACTAAGGTTGTACAAGAATGGAACAAGTTTTTGGCCATATTTTGCTTGGTTGCAATTTTTGTTGATCCATTATTTTTCTTCTCGATCTATGTGGATGTGAATAAGAATAATATAAGTATTGTTATCGACTGGAAAATGGCAAAAATACTTGTTTTACTTAGAAGCGTAACTGATGTTGTGTATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAACGGTGGTTGGTGCTGGAGATTTAGTTGATCAGCCCAAGGAAATTGCTCTTAATTACTTGAAGCGTTATTTTTTCTTCGACTTATTTGTCGTATTACCTCTTCCTCAGATAATAATATACTTTGTCCTACCAAGTTCCTTGGTGTCTTCAGAAGCAAATTATGCTAAGAATCTTCTACGTCTAGCGATCCTAATACAGTATATTCCTAGATTGTTCAGATTTTTGCCTCTACTAATTGGCCAGTCTCCAACCGGATTCATATTTGAATCTGTCTGGGCAAGTTTCATTTTAAATCTTCTCATTTTTATGCTATCTGGCCATGTCGTCGGTGCATGCTGGTACCTCTTTGGTCTACAGAGGGTTAACGAATGTTTGCAAGATAAGGGTACCTCTGATTGTTTGGATTCCTCATCTGGTGCTTTTTCTTATGGAATCTATGCCAATGCTATACCACTTTATATAGAAACTAGTGTGGTCAACAAATATGTGTATGCATTGTTTTGGGGATTTCAGCAAATCAGTACTCTGGCTGGTAATCAAGTCCCTAGCTATTTTGAATGGGAAGTCCTCTTTACAATGTCCATCATTGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAAAACTTTCTTCAGGGTCTTGGACGGAGGAGACTAGAAATGCAACTTAGAGGCCGTGATGTTGAGAAATGGATGAGCCACCGTCGCTTATCAGAAGAACTCAAAAGGAGGGTACGGGAGGCTGAACGCTATAGTTGGGCTGCAACAAGAGGTGTTCCGGAGAAAATGGTTCTCGAGAATTTGCCAGAAGATCTCCTGATAGACATAAGACGCCATCTCTTCAATTTTGTTACGAAAGTTCGAATATTTTCACATCTTGATGAGGATGAGCCTATCTTAGAAGCCATTCGGGAGAGACTAATACAGACCACATACCTCAAAGAAAGCAGAATTTTGAGCCGAGGTGGTCTTGTACAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGAAGATGGAATTCCGGTTCCGTTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAATCTTCTGAAAGCAAAGATGGTAAAAATAAGCTTCAAGGAGAGGGGTTGACTAGTGACAGAACAGTAAAATGCTTAACCAACGTGGAGGCGTTTTCTCTTCGCGCTAAAGACATTGAAGAAGTCACAACTCTTTTCGCAAGTTTCTTGCGGAGCCCTCGTGTTCAAGGAGTCATAAGGTATGAATCGCCTTATTGGAGATCGCTTGCAGCAAACAGAATTCAGGTGGCATGGAGATACATGAAAAAGCGTCTCCGTAACGCTCATAGAGACAAAATGATTATTAAATATTGA 2145 0.4009 MNHFDYDEVPIMFEACSQRSDEPEDSSFRRNISRTPSASISISMAYLDQSETQSKLARKTPIDQMSGPLYATGNPFQNSLVKAGNRKDGYRWDNDYGRKNEHLLMSGPLGMCNDPYCTTCPTYIKVSQQRKPIASIIFDPKFHNSLYGDFKGFGRKLLSLCSPCIPGVMNPHTKVVQEWNKFLAIFCLVAIFVDPLFFFSIYVDVNKNNISIVIDWKMAKILVLLRSVTDVVYFLNILLQFRLAYVSPESTVVGAGDLVDQPKEIALNYLKRYFFFDLFVVLPLPQIIIYFVLPSSLVSSEANYAKNLLRLAILIQYIPRLFRFLPLLIGQSPTGFIFESVWASFILNLLIFMLSGHVVGACWYLFGLQRVNECLQDKGTSDCLDSSSGAFSYGIYANAIPLYIETSVVNKYVYALFWGFQQISTLAGNQVPSYFEWEVLFTMSIIGLGLLLFALLIGNIQNFLQGLGRRRLEMQLRGRDVEKWMSHRRLSEELKRRVREAERYSWAATRGVPEKMVLENLPEDLLIDIRRHLFNFVTKVRIFSHLDEDEPILEAIRERLIQTTYLKESRILSRGGLVQKMVFIVRGKLESIGEDGIPVPLSEGDACGEELLRWYLEQSSESKDGKNKLQGEGLTSDRTVKCLTNVEAFSLRAKDIEEVTTLFASFLRSPRVQGVIRYESPYWRSLAANRIQVAWRYMKKRLRNAHRDKMIIKY 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi286g00002 714 Pfam Ion transport protein 179 469 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi286g00002 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 112 705 - -
Vivi286g00002 714 Gene3D - 180 466 - -
Vivi286g00002 714 SUPERFAMILY Voltage-gated potassium channels 171 471 - -
Vivi286g00002 714 SUPERFAMILY cAMP-binding domain-like 470 662 IPR018490 -
Vivi286g00002 714 Gene3D Jelly Rolls 540 664 IPR014710 -
Vivi286g00002 714 Gene3D Helix hairpin bin 469 534 - -
Vivi286g00002 714 CDD CAP_ED 542 668 IPR000595 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi286g00002 2 620 Ion Channels AT3G17700 53.698 0.0 666