Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi286g00001 ATGGCTTACTTGGATCAATCCGAGACACAATCGAAACTTGCAAGGAAAACTCCGATCGACCAGATGAGTGGTCCACTATATGCAACTGGAAATCCTTTTCAGAATAGTTTAGTGAAGGCAGGGAATAGGAAAGATGGATATCGTTGGGATAACGACTATGGCAGAAAAAATGAACACTTGTTGATGTCTGGACCACTCGGAATGTGTAATGATCCTTATTGCACTACTTGCCCGACTTACATCAAAGTTTCTCAGCAAAGAAAACCTATAGCTTCAATTATCTTTGATCCCAAGTTCCACAATTCTCTTTATGGCGACTTCAAAGGTTTTGGAAGAAAACTTCTTTCTTTATGCTCTCCATGTATTCCTGGAGTTATGAATCCTCACACTAAGGTTGTACAAGAATGGAACAAGTTTTTGGCCATATTTTGCTTGGTTGCAATTTTTGTTGATCCATTATTTTTCTTCTCGATCTATGTGGATGTGAATAAGAATAATATAAGTATTGTTATCGACTGGAAAATGGCAAAAATACTTGTTTTACTTAGAAGCGTAACTGATGTTGTGTATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAACGGTGGTTGGTGCTGGAGATTTAGTTGATCAGCCCAAGGAAATTGCTCTTAATTACTTGAAGCGTTATTTTTTCTTCGACTTATTTGTCGTATTACCTCTTCCTCAGATAATAATATACTTTGTCCTACCAAGTTCCTTGGTGTCTTCAGAAGCAAATTATGCTAAGAATCTTCTACGTCTAGCGATCCTAATACAGTATATTCCTAGATTGTTCAGATTTTTGCCTCTACTAATTGGCCAGTCTCCAACCGGATTCATATTTGAATCTGTCTGGGCAAGTTTCATTTTAAATCTTCTCATTTTTATGCTATCTGGCCATGTCGTCGGTGCATGCTGGTACCTCTTTGGTCTACAGAGGGTTAACGAATGTTTGCAAGATAAGGGTACCTCTGATTGTTTGGATTCCTCATCTGGTGCTTTTTCTTATGGAATCTATGCCAATGCTATACCACTTTATATAGAAACTAGTGTGGTCAACAAATATGTGTATGCATTGTTTTGGGGATTTCAGCAAATCAGTACTCTGGCTGGTAATCAAGTCCCTAGCTATTTTGAATGGGAAGTCCTCTTTACAATGTCCATCATTGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAAAACTTTCTTCAGGGTCTTGGACGGAGGAGACTAGAAATGCAACTTAGAGGCCGTGATGTTGAGAAATGGATGAGCCACCGTCGCTTATCAGAAGAACTCAAAAGGAGGGTACGGGAGGCTGAACGCTATAGTTGGGCTGCAACAAGAGGTGTTCCGGAGAAAATGGTTCTCGAGAATTTGCCAGAAGATCTCCTGATAGACATAAGACGCCATCTCTTCAATTTTGTTACGAAAGTTCGAATATTTTCACATCTTGATGAGGATGAGCCTATCTTAGAAGCCATTCGGGAGAGACTAATACAGACCACATACCTCAAAGAAAGCAGAATTTTGAGCCGAGGTGGTCTTGTACAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGAAGATGGAATTCCGGTTCCGTTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAATCTTCTGAAAGCAAAGATGGTAAAAATAAGCTTCAAGGAGAGGGGTTGACTAGTGACAGAACAGTAAAATGCTTAACCAACGTGGAGGCGTTTTCTCTTCGCGCTAAAGACATTGAAGAAGTCACAACTCTTTTCGCAAGTTTCTTGCGGAGCCCTCGTGTTCAAGGAGTCATAAGGTATGAATCGCCTTATTGGAGATCGCTTGCAGCAAACAGAATTCAGGTGGCATGGAGATACATGAAAAAGCGTCTCCGTAACGCTCATAGAGACAAAATGATTATTAAATATTGA 2016 0.4003 MAYLDQSETQSKLARKTPIDQMSGPLYATGNPFQNSLVKAGNRKDGYRWDNDYGRKNEHLLMSGPLGMCNDPYCTTCPTYIKVSQQRKPIASIIFDPKFHNSLYGDFKGFGRKLLSLCSPCIPGVMNPHTKVVQEWNKFLAIFCLVAIFVDPLFFFSIYVDVNKNNISIVIDWKMAKILVLLRSVTDVVYFLNILLQFRLAYVSPESTVVGAGDLVDQPKEIALNYLKRYFFFDLFVVLPLPQIIIYFVLPSSLVSSEANYAKNLLRLAILIQYIPRLFRFLPLLIGQSPTGFIFESVWASFILNLLIFMLSGHVVGACWYLFGLQRVNECLQDKGTSDCLDSSSGAFSYGIYANAIPLYIETSVVNKYVYALFWGFQQISTLAGNQVPSYFEWEVLFTMSIIGLGLLLFALLIGNIQNFLQGLGRRRLEMQLRGRDVEKWMSHRRLSEELKRRVREAERYSWAATRGVPEKMVLENLPEDLLIDIRRHLFNFVTKVRIFSHLDEDEPILEAIRERLIQTTYLKESRILSRGGLVQKMVFIVRGKLESIGEDGIPVPLSEGDACGEELLRWYLEQSSESKDGKNKLQGEGLTSDRTVKCLTNVEAFSLRAKDIEEVTTLFASFLRSPRVQGVIRYESPYWRSLAANRIQVAWRYMKKRLRNAHRDKMIIKY 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi286g00001 671 Gene3D Helix hairpin bin 426 491 - -
Vivi286g00001 671 SUPERFAMILY cAMP-binding domain-like 427 619 IPR018490 -
Vivi286g00001 671 Pfam Ion transport protein 136 426 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi286g00001 671 Gene3D - 137 423 - -
Vivi286g00001 671 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 69 662 - -
Vivi286g00001 671 Gene3D Jelly Rolls 497 621 IPR014710 -
Vivi286g00001 671 SUPERFAMILY Voltage-gated potassium channels 128 428 - -
Vivi286g00001 671 CDD CAP_ED 499 625 IPR000595 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi286g00001 12 577 Ion Channels AT3G17700 56.748 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi286g00001 K05391 - ccaj:109789004 930.628