Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi285g00006 ATGTTTGGGAGAGACACCGTTCAAAATCACACTCAATGTATTACTGAAGCGGAGAAGTATGGTCCGAAAGGCCAAGGTAAAGCTTTGAATGGTTCAGCTGCCAAGTCGGGCAAAGATAAGAAGCAAAGGCCAGAGGTTGATATTAATGTGGGTTTATCTAATTGTCCTCCTTGGTTCTGTAGTTGTTGCAATACAAGAGCTACAAGCCAGCAAGCGCTTCTTCTCCATGCTGAAGGAAAGAAACACGGGGCAAAAGCCCAAGCATTTCATGCTTCGCAGCAGCCATCCGTCCAGGCAGAGAAACATGCCCCTGATGCAAAGGATGCAGTAGAGGCTGCTTCTGATGGTGTAGCGAAGAAAGATGGCATCAATGCGGAGCATCCCAAATTGCAAGAGCCTTCTGAAGAAAATAACTTGAAACCAGCGAGTGAAGTTTCTTCAGAAAAGAAAAAGAGGAAACTTGATGCAACAAAGGGTGGTCTTATTAAAAAATGCAAGATTGACGCTTCTGTTGACACAAAAAATGACGAAGTAATTCTAGGCGAGAAGACTAAAGATAGGAAAATAAAATGGAAGAAGTTTATCAAAGCAGCCTTGAAATCTCATCCTGGTGGATTGAAGATGAAGAAAATGAGAAAAGTTGTATTCAAAGCGCTGCAAGAATCTGGCATTGTAGTAAATGAAAATGAATTGAGTGACACCCTTGATCAGAATATAAGTTCTAGCTCTAAATTGCAGTTAAAAAGAAGTTTGTTTGATTAG 762 0.4108 MFGRDTVQNHTQCITEAEKYGPKGQGKALNGSAAKSGKDKKQRPEVDINVGLSNCPPWFCSCCNTRATSQQALLLHAEGKKHGAKAQAFHASQQPSVQAEKHAPDAKDAVEAASDGVAKKDGINAEHPKLQEPSEENNLKPASEVSSEKKKRKLDATKGGLIKKCKIDASVDTKNDEVILGEKTKDRKIKWKKFIKAALKSHPGGLKMKKMRKVVFKALQESGIVVNENELSDTLDQNISSSSKLQLKRSLFD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi285g00006 253 MobiDBLite consensus disorder prediction 15 45 - -
Vivi285g00006 253 Gene3D Classic Zinc Finger 35 88 - -
Vivi285g00006 253 Pfam LYAR-type C2HC zinc finger 1 20 IPR014898 -
Vivi285g00006 253 MobiDBLite consensus disorder prediction 126 153 - -
Vivi285g00006 253 SMART ZnF_U1_5 55 89 IPR003604 GO:0003676|GO:0008270
Vivi285g00006 253 MobiDBLite consensus disorder prediction 85 109 - -
Vivi285g00006 253 Pfam Zinc-finger of C2H2 type 58 82 - -
Vivi285g00006 253 SUPERFAMILY beta-beta-alpha zinc fingers 49 89 IPR036236 -
Vivi285g00006 253 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 2 249 IPR039999 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi285g00006 41 116 C2H2 Transcription Factor Family AT2G19380 59.211 9.66e-21 89.4