Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi284g00004 ATGGGATTCTCCAAAACCTCTCTATCTCTTTTCTTATTCTTCATTTTACTTTCTTCATCTTATGCAACTTCTCGCTTCACACGTCAACAACGATTTCCAACAAGAAAATTTTCATCAAATGGACTAGCTGAACAACTTATAAGAAGCTTGAACTTATTCCCAAAGCATTCAGCTAATATACATGGTGAATACTCTATCGATGATTTCGTCCCGGGAAAAATCGTAGAGAAGTCGTTTTCGTTTCTCGCTAGTTCTAATGGAACTTCTGTTGAAGATCTCGGTCACCATGCTGGATTCTATACGCTTCCTCATTCCCAAAATGCAACGATGTTCTATTTTTTCTTTGAATCAAGAAATGGTGCTAAGGATGCACCAGTTGTGTTATGGTTGACCGGAGGTCCAGGTTGTGCCAGTGAATTAGCATTGTTTTATGAGAATGGTCCTTTCAAAATTAACAATGATCTGTCTCTTTCATGGAATGACTTTGGTTGGGACAAGGGATCAAATATTATTTTTGTTGATCAACCCATTGGGACAGGTTTTAGCTACGCTCCTGATTCAAGTTATATTCCTGATGATGAATATAGTGTTACCGAGGATATGTACGATTTCTTAGGGGCATTTTTCAGGGAACACCCTGAATTGGTTAAGAATGAATTTTATATTGCTGGAGAATCATATGCTGGACAGTATATTCCACCTCTTGCATCTCGAGTTCAAAAAGGAAACAAAGACATAAACTTAAAGGGTTTTGCTATTGGTAATGGAATGACCAAACCAGAAACTCAATACCCAGCATACACTCAGTTTGCAGTTGATAACAAGTTGATCACAAAGGAAGATCAAGCGAATATCAACAACAAGTTGGTTCCACCATGTTTGGAGGCCATCGATACTTGTGGGGTTGATGGTCAAGAAGCTTGCGAAACAGCTTTAAAACAATGTCAAAAAATATTTACGAGTATATTGGACATTGCAGGCAACATTAATTACTATGACATCAGAAAGAAATGTGAAGGAAAATTGTGTTATGATTTCTCAAATTTGGAGAAATTTCTAAATAATACTGCAGTTAGGAAAGCATTAGGTGTTGGGAACATAGAGTTTGTTTCATGCAGCAGTGAAGTGCATGATGCTTTGGTTCAAGATTTGATGTTTAACTATGACCAATATATTCCACCACTTCTTGAGAATGGAATCAAAGTTCTTATATATGCTGGAGAATTCGATTTTATTTATAATTGGCTTGGGAATTCTCAATGGGTTCATGCCATGAAGTGGTCAGGTAAAGAACAATTTGTGGCCTCCAAAACAGTTCCTTTTTTGGTTGATGGTAAAAATGCGGGATCGTTGAATAATTATGGACTTCTCTCTTTTCTAAAGGTGAATGGTGCTGGACATATGGTTGCTATGGATCAACCAAAAGCTGCACTTCAGATGTTGGTTAACTGGATGCAAGGGAACCTGAATGGGACGAAGATTTAA 1485 0.3744 MGFSKTSLSLFLFFILLSSSYATSRFTRQQRFPTRKFSSNGLAEQLIRSLNLFPKHSANIHGEYSIDDFVPGKIVEKSFSFLASSNGTSVEDLGHHAGFYTLPHSQNATMFYFFFESRNGAKDAPVVLWLTGGPGCASELALFYENGPFKINNDLSLSWNDFGWDKGSNIIFVDQPIGTGFSYAPDSSYIPDDEYSVTEDMYDFLGAFFREHPELVKNEFYIAGESYAGQYIPPLASRVQKGNKDINLKGFAIGNGMTKPETQYPAYTQFAVDNKLITKEDQANINNKLVPPCLEAIDTCGVDGQEACETALKQCQKIFTSILDIAGNINYYDIRKKCEGKLCYDFSNLEKFLNNTAVRKALGVGNIEFVSCSSEVHDALVQDLMFNYDQYIPPLLENGIKVLIYAGEFDFIYNWLGNSQWVHAMKWSGKEQFVASKTVPFLVDGKNAGSLNNYGLLSFLKVNGAGHMVAMDQPKAALQMLVNWMQGNLNGTKI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi284g00004 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Vivi284g00004 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Vivi284g00004 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Vivi284g00004 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Vivi284g00004 494 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Vivi284g00004 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 95 474 IPR001563 GO:0004185|GO:0006508
Vivi284g00004 494 SUPERFAMILY alpha/beta-Hydrolases 94 487 IPR029058 -
Vivi284g00004 494 Gene3D alpha/beta hydrolase 75 492 IPR029058 -
Vivi284g00004 494 Pfam Serine carboxypeptidase 92 487 IPR001563 GO:0004185|GO:0006508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi284g00004 352 487 Calmodulin-binding Proteins AT2G22960 23.239 8.38e-07 47.8