Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi282g00011 ATGGCAAAGAGGTCTAATTCTGAGAAGTATGTTAATGTGACTAAGGTCCGTCCGGGTTATAAGAGAGAGTTTCGTCGCGCCTATGAGACTCACTCAAAGATCTGTCGTGGTCGTTCGACGTCTCTCAGTCGAACCAGGCCAAGAAATAACCGGAGTATGGTTCATGTTCCTGAACCTAGGATAAGAAATGATGTGGAAAATATCGGTGTCGCTGTGAATGGTAATTCGAGTGAAGAAGAAGCTCGGAGTGAGGTGGATGATTTGAATGTTGAGGCAATGGATGAAATATCTCATCCTGTTCGTGAAATTGGGGAGACCAGTAGAGATCGCAGATTGAAGGTGTCAACTAAAGGGAAAAAGTTCAAACCTGTTTTTCGCAACTTCAAGAGGTTTCCCTCGAAGCTGAAGGACCTGCTAGACTCGAGGATTCTGGATGGATTGAACGTGAAATATATCCGCGGCATCAGGGTGCGAAAACCTGGAGATAAAGCGTTACCGGGAGTGATCAAAGGCGATGGAATCGAGTGTTATTGCGATATTTGTAAGGGAGAAAAGGTTGTGAGCCCTGCTGTGTTTGAGGTTCATGCTGGAAGTGCAAACAAGCGTCCTCCTGAGTATACTTACCTCGAAAATGGGAATTCTGTTCGTTGGGTAATGAATATATTTTTTGACACTCCTTTAGACAAATTGGAGGAATATGTTGATGCTGCTGTTGGAGACTTTACCATCAAGAAGTCAAAGTTCTGTGTCAACTGTAGAGATGTTAATGTTGTCTCGAGACTCTTCTGCATTTCATGCGATCCATCGAAGGGATGCCATCCTAGACCAACTCGTACAACCGAGACTATTAATAGCTGTGTTTCAATACCACCATCACCACCACCGTCACCACCACCACCACCACCGGTTATATCAGGGACCCCGGAACAAGCTGTGCCTCAAAACTCATACAAAGGAATGAAGTTCAGCGCAGCTGTCAATAAGAGTCAGGGGAAAATAACTAGAAAGGACCAAAGCTTGCACAAGTTGGTTTTTCAAGCATTGGAACATAATGCTAATGTGACATACATTGTTCGTGGAGAGAAACTATTGGATGGTAAAATAGACAAAGACACCCCTGGAATTATGTGTAGTTGCTGTAACAATGTGGTCAGCCCTTCTACATTTGAAGCACATGCTGGCTGGGCATCCCGACGCAAGCCTTACCGGCACATATTTGCCGGTGAAGTCTCACTACATGAGTTGTCCATTTCTATGTTGAAAAAGCAGACAATTTCTGTGAGTACCGACAGCGATGGCCGCTGCAGTATCTGTGAACAAGGAGGACATCTTTTATGCTGTGATGGATGCCCAAGAGCTTTTCACTTAGAATGTGTGCCTCTTGAAACTGAACCAGGTCGCATTTGGTACTGCAAATATTGCTGTCATAATGTAAACCATAACGAAAAACGTGAAGGGCGTAGCGCAAAAGGTCGGGCAACTCGAAGGGTTTCGGGGAAGAGAGGCCAGAGAGGCCCCCTTACGGTAAATGATCTCGATATCGTCGACGGTGGATGTCAACTGTGCAGGGAAGATGATTTCGAGCTAGTAGATTTTGGTCCTCGGACAGTAATTATATGTGACCAGTGTAATAAGGAATTTCACATAGGGTGTTTGAAGGATCATAAGATCGAAAACCTAGAGAAATTACCTGAAGGGGACTGGTTCTGCGGCTCTGAATGTCTTCAAGTTCGGGCTTCTTTGCAGAATTTAGTGAATCGCGGGGACGCGCCAGTTCCAGATTCCCTCCTAAGTTTGATTAAAAAGAAGCGTGAGCAAAAAGGTGTAGAAACTGATTCTGTCCTTGATGTAAAATGGAGGATTCTGAACTGGAAGTTGCTTGCCTCTGAAGAAATTCGGGCGCTGCTTTCGAAGGCTGTTGCTATCTTTCATGAACAATTTGATCCCATAGTGGATGCTGAAACAGGCGCAGATTTCATTCCATCAATGCTTTATGCGAGGACCCTCAAGGATCAGTATTTTGGTGGAATGTATTGTGCAGTGCTCACTGTCAACCAAAAGGTTGTATGCGCGGGGACATTCCGTTTGTTCGGGAGAGAAGTGGCGGAGCTTCCCTTAGTTGCAACTCATGGAGCTAGCCAAGGAAAGGGTTACTTCCAAGCCCTGCTTGCCTGCATCCAGGGCGTGCTTGGAGAGTTAAGAGTGGGACGGTTATTCTTACCGGCTGCTCATGAAGCTAAATCATTATGGACTAGGAAATACGGGTTTATGGCGCTAGACCAAGATGAGATGAATTTTATCACAAGATTGTACCGCTTGATGATGTTTAAAGGGGCAGCATTACTACAGAAGCCGGTTCCTCGGCCCATCATAACCGAGTTCGTTGAAGAAGGTGCATGA 2400 0.4533 MAKRSNSEKYVNVTKVRPGYKREFRRAYETHSKICRGRSTSLSRTRPRNNRSMVHVPEPRIRNDVENIGVAVNGNSSEEEARSEVDDLNVEAMDEISHPVREIGETSRDRRLKVSTKGKKFKPVFRNFKRFPSKLKDLLDSRILDGLNVKYIRGIRVRKPGDKALPGVIKGDGIECYCDICKGEKVVSPAVFEVHAGSANKRPPEYTYLENGNSVRWVMNIFFDTPLDKLEEYVDAAVGDFTIKKSKFCVNCRDVNVVSRLFCISCDPSKGCHPRPTRTTETINSCVSIPPSPPPSPPPPPPVISGTPEQAVPQNSYKGMKFSAAVNKSQGKITRKDQSLHKLVFQALEHNANVTYIVRGEKLLDGKIDKDTPGIMCSCCNNVVSPSTFEAHAGWASRRKPYRHIFAGEVSLHELSISMLKKQTISVSTDSDGRCSICEQGGHLLCCDGCPRAFHLECVPLETEPGRIWYCKYCCHNVNHNEKREGRSAKGRATRRVSGKRGQRGPLTVNDLDIVDGGCQLCREDDFELVDFGPRTVIICDQCNKEFHIGCLKDHKIENLEKLPEGDWFCGSECLQVRASLQNLVNRGDAPVPDSLLSLIKKKREQKGVETDSVLDVKWRILNWKLLASEEIRALLSKAVAIFHEQFDPIVDAETGADFIPSMLYARTLKDQYFGGMYCAVLTVNQKVVCAGTFRLFGREVAELPLVATHGASQGKGYFQALLACIQGVLGELRVGRLFLPAAHEAKSLWTRKYGFMALDQDEMNFITRLYRLMMFKGAALLQKPVPRPIITEFVEEGA 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi282g00011 799 Gene3D - 625 769 - -
Vivi282g00011 799 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 665 762 IPR016181 -
Vivi282g00011 799 PANTHER AUTOIMMUNE REGULATOR 77 786 - -
Vivi282g00011 799 Pfam Tify domain binding domain 167 220 IPR032308 -
Vivi282g00011 799 Pfam Tify domain binding domain 374 407 IPR032308 -
Vivi282g00011 799 ProSiteProfiles Zinc finger PHD-type profile. 432 477 IPR019787 -
Vivi282g00011 799 SUPERFAMILY FYVE/PHD zinc finger 421 479 IPR011011 -
Vivi282g00011 799 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 512 577 IPR013083 -
Vivi282g00011 799 MobiDBLite consensus disorder prediction 287 310 - -
Vivi282g00011 799 ProSitePatterns Zinc finger PHD-type signature. 435 474 IPR019786 -
Vivi282g00011 799 MobiDBLite consensus disorder prediction 288 307 - -
Vivi282g00011 799 CDD PHD1_AIRE 435 474 - -
Vivi282g00011 799 SUPERFAMILY FYVE/PHD zinc finger 511 571 IPR011011 -
Vivi282g00011 799 SMART PHD_3 518 574 IPR001965 -
Vivi282g00011 799 SMART PHD_3 434 475 IPR001965 -
Vivi282g00011 799 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 420 502 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi282g00011 87 799 PHD Transcription Factor Family AT2G36720 37.420 1.24e-154 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi282g00011 - - vvo:131628194 1615.9