Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi282g00002 ATGTCGGTAACACCACCATGGCTTGAACCATTACTATCAACCACATTCTTCTCTTCCTGCAAAACTCACATCAACGCGCCGAGAAACGAATGCAACATGTATTGTCTCGATTGTATGGAATCATTCTGTTTTTACTGCAAACAATCCTGGCACAACGACCATCAACTAATTCAAATACGGAGATCGTCTTATCATGATGTTGTGAGGGTGGTGGAGATTCAGAAGGTATTGGATATAACTGGAGTTCAAACGTATGTGATTAACAGTGCTAGAGTGATTTTTCTTAATGAGAGGCCACAGAATCAGATTAAGAATACTAATGCTGTTATTAGTGGAAGTAAGAGTAATTCACATTTGTGTGAAATTTGTGCAAGATATTTATTGGACCCTTTTCGTTTCTGTTCTTTGGGTTGCAAGCTTGTAGGAATAAAGAAAAATGGGAATGCAAGCTTTGTCTTAAGCACAAAGAAAGAGGAAGAAATAGGTAAAATGCAGGAAAGAAAGTTGCTATCAAAGGAAGAAGACGAAGAAATATTAATAATGCGTGAAGGAATCCACAAACAACAAGTATACAAAAGCACGTCTTCTCCTTATTCATCTCAACAAGCTTGTTCAAATTCAAGGAGAAGAAAGGGAATACCTCATAGAGCACCTTTAGGACCCTAA 666 0.3769 MSVTPPWLEPLLSTTFFSSCKTHINAPRNECNMYCLDCMESFCFYCKQSWHNDHQLIQIRRSSYHDVVRVVEIQKVLDITGVQTYVINSARVIFLNERPQNQIKNTNAVISGSKSNSHLCEICARYLLDPFRFCSLGCKLVGIKKNGNASFVLSTKKEEEIGKMQERKLLSKEEDEEILIMREGIHKQQVYKSTSSPYSSQQACSNSRRRKGIPHRAPLGP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi282g00002 221 ProSiteProfiles Zinc finger B-box type profile. 20 59 IPR000315 GO:0008270
Vivi282g00002 221 SUPERFAMILY B-box zinc-binding domain 19 61 - -
Vivi282g00002 221 MobiDBLite consensus disorder prediction 189 208 - -
Vivi282g00002 221 MobiDBLite consensus disorder prediction 189 221 - -
Vivi282g00002 221 Pfam PLATZ transcription factor 60 140 IPR006734 -
Vivi282g00002 221 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 219 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi282g00002 PLATZ 7.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi282g00002 - - gmx:100787414 335.88