Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi280g00005 ATGGCATCCCAATCCTCCAGCATCTCAGTCACTTCACAAAATCATGGCGATTCATCCAAAATAAAAAATGTGATGGGTAAAGAGATTGAACAAGGTCAATCTTCAAAATCTGATTCCAACATGCCTATTGATTTTGTGAAGCTACCGAAAGAGGATTCGGTTGACGCGTCAACGGTGCAAGAACACAATTTTTTTAGCCCTATTCAAGTTCGTCGTTCGTGGTCCGATTCTCCTAATGCTGACAATGAAAAGAAAAAAGAGAAAACCATTGGAGAGAAGAACTCAGAGTCAAAGACGTCTTATCCATGCAACTTTTGCATGAGAGAATATCCTACTTTACAAGCGTTAGGAGGGCACCAGAACGCCCATAAAGCGGAACGTGCTTTACAAAAGCTGCGCGAACAAAGGTATGGTGCTTTAGGGTTAGGACAAACTTACTTGAACCCTTGTTTTCGTTATCCTAGTGGTCTTTATTCACCCTATGGATCACTCGGGGTTAGAATGAATTCAATGATTCAAAAACCATCTTTCTTTAGCCCTAGGGTTACACCACATAATTTTGCATATGGTCATGGTGGTATGTATTTGCAAGAGATATTAAACCCTTCCCTTGTTAATTTGAGAAACAGTATGGAAGGTAGTAGCAGGGTTGGAATTCCGGGTCTTGGTGGTGCAACTTCTTCTAGAGTTGAAAATGATGCAAATAATAAAATTGCTGCTTTTCTAAAACTTGGAGAGTCTTCCAAAGATGTTGCCACAAGTTCAAACTCAATCATAGAGAAGAATTTTTTTATGGCTCCTGCTCCTGCCAAAGATGAAATTCATCAATCAAAGTTCAACACTGAAGATGAACCTTCCGATTCTGAATCTTCTGGACTTGATTTGACACTTAAGCTTTGA 900 0.3967 MASQSSSISVTSQNHGDSSKIKNVMGKEIEQGQSSKSDSNMPIDFVKLPKEDSVDASTVQEHNFFSPIQVRRSWSDSPNADNEKKKEKTIGEKNSESKTSYPCNFCMREYPTLQALGGHQNAHKAERALQKLREQRYGALGLGQTYLNPCFRYPSGLYSPYGSLGVRMNSMIQKPSFFSPRVTPHNFAYGHGGMYLQEILNPSLVNLRNSMEGSSRVGIPGLGGATSSRVENDANNKIAAFLKLGESSKDVATSSNSIIEKNFFMAPAPAKDEIHQSKFNTEDEPSDSESSGLDLTLKL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi280g00005 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 101 128 IPR013087 -
Vivi280g00005 299 MobiDBLite consensus disorder prediction 1 20 - -
Vivi280g00005 299 MobiDBLite consensus disorder prediction 274 299 - -
Vivi280g00005 299 ProSitePatterns Zinc finger C2H2 type domain signature. 103 123 IPR013087 -
Vivi280g00005 299 MobiDBLite consensus disorder prediction 1 48 - -
Vivi280g00005 299 Pfam C2H2-type zinc finger 101 125 - -
Vivi280g00005 299 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 3 299 IPR044246 GO:0009788
Vivi280g00005 299 MobiDBLite consensus disorder prediction 70 96 - -
Vivi280g00005 299 MobiDBLite consensus disorder prediction 77 94 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi280g00005 95 191 C2H2 Transcription Factor Family AT5G27880 35.965 4.55e-11 60.5