Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi277g00027 ATGGAGTTTCCTTACCATTACATTCTCCCGACAACAATCCTTCTCTTATTTATGTTTCCTAATTCAGTCAACTGTCAACAATTATATCTTAACACAACTGTCACTGATTGCTCAGACAACCCTTCAGCACCAAAAGGATACCTATGCAATGGCCCTCAAATGTCATCATGCAATTCATTCTTAGTTTTCAGGTCCAAACCCCCTTATGACAATCCTATAACTATTGCCAACCTTCTTAGTTCTGAAGCATCAACCATAGCTTCAATTAACAATATCTCAAGAGATACCAAGCTTCCTTCCAATAAAACAATCATTGTCCCTAACTTGTGTTCATGTTCTGGAAATATCTATCAGCATAACACCCTTTACACTGTCAAAAAAGGTGATACCTACTTTCAACTGGTAAATAAAACTTACCAAAGCCTCACAACATGTCAGGCTTTAAGGGGTCAGAATTACTATGCTTCTGTAAACATTACAATTGGTGCTCAGCTCACAATTCCATTGCTTTGTGCTTGTCCTACGTCAAAACAGATGGCAAAAGGGATCACCTCCTTGCTGGTTTACACAGTGAACTATGGCGAAACTGTTGACTCTATAGCTAAGGCTTATGGTGTTGATGAACAAAGTATACTAGAAGCAAATGAATTGCAAGTGGCACCAAATAAAAGCAGAAAGGTGGTCCTCTTTGCCTTGTCACCTATATTAGTTCCTCTTCGAGGCAAGAGTTGCAAAGAGGATCCTGATAGTTTCTATTGTACTTGCTCTCAAGGAAGGCTTGAGGACGGAACCTGTAACGATTCTCATGGGCAAAAGTTTCCAGCCAAATTGATTGCTGCATTAGGGGTTGGAATTGGTGCAGCGTTTCTGATTTTGTTTCTTTTGGGTTACAAGTTATATCAATATATACAGAAAAGAAGAGCGAGTATTCGTAAGGAAAAGCTATTCAGACAAAATGGGGGTTACCTGTTACAAGAGAAGTTATCATCTTATGGAAATGGAGAAATGGCAAAGCTTTTCACAGGAGAAGAGCTTCAAAGAGCAACCGATAACTACAACCAGAGTAGATTTCTCGGTCAGGGTGGCTATGGCACGGTGTACAAAGGAATGTTACCAGATGGAACCATAGTAGCAGTTAAGAAGTCGAAACAGCTTGACAGGAACCAAGTAGAAGCTTTTGTTAATGAAGTGGTCATCTTATCTCAGATCAACCACAGAAACATTGTTAAACTCTTAGGATGTTGTATTGAGACAGAAACTCCAATACTTGTCTATGAATATATTAATAACGGAAATCTTTCTCAACATATACATAGGAGAGACAATGAATCATCGCTTTCATGGGAAATTCGCCTTCGAATTGCGTGTGAAGTTGCTGGAGCAGTGGCATATATGCATTTTTCAGCTTCCATTCCAATCTTCCACAGAGACATCAAACCAACCAACATACTTCTGGACAGCAACTATAGTGCCAAAGTGTCTGATTTTGGAACATCTAGAACAATTCCACTAGATAAGACTCATTTAACCACAGCTGTTGGAGGCACTTTCGGCTACATGGACCCTGAATATTTCCAGTCCAGTCAATTTACAGATAAGAGTGATGTATATAGTTTCGGTGTTATTCTTGTAGAGATTATAACCGGCAGAAAGCCAATAACATTCAATGATGAAGATGAGGGACAAAATATGACTGCACATTTCCTTTCTGCGATGAAAGACAACCAACTTTCTCATGTTGTAGACAACACAGTGCTTAAGGAAGCGAGAAAAGAAGACATTCTTGCTACTGCAAATCTTGCAATGAGGTGTTTGAGACTTAATGGTAAGAAAAGACCAACAATGAAAGAGGTTTCAGCAGAATTAGAAGCACTGAGAAAGGTGCAAAGTTTTTTATATATCAAAGATGATCATAAGAAACCAAGTGATGGACAATTATTTGAGCATTCAACTAATGTCATATCTCAGGAGTCCACAGTGGAAAGTTTTTCACTATCCTCTCAAATGGAGTCTACTTCCTTCTAA 2025 0.3881 MEFPYHYILPTTILLLFMFPNSVNCQQLYLNTTVTDCSDNPSAPKGYLCNGPQMSSCNSFLVFRSKPPYDNPITIANLLSSEASTIASINNISRDTKLPSNKTIIVPNLCSCSGNIYQHNTLYTVKKGDTYFQLVNKTYQSLTTCQALRGQNYYASVNITIGAQLTIPLLCACPTSKQMAKGITSLLVYTVNYGETVDSIAKAYGVDEQSILEANELQVAPNKSRKVVLFALSPILVPLRGKSCKEDPDSFYCTCSQGRLEDGTCNDSHGQKFPAKLIAALGVGIGAAFLILFLLGYKLYQYIQKRRASIRKEKLFRQNGGYLLQEKLSSYGNGEMAKLFTGEELQRATDNYNQSRFLGQGGYGTVYKGMLPDGTIVAVKKSKQLDRNQVEAFVNEVVILSQINHRNIVKLLGCCIETETPILVYEYINNGNLSQHIHRRDNESSLSWEIRLRIACEVAGAVAYMHFSASIPIFHRDIKPTNILLDSNYSAKVSDFGTSRTIPLDKTHLTTAVGGTFGYMDPEYFQSSQFTDKSDVYSFGVILVEIITGRKPITFNDEDEGQNMTAHFLSAMKDNQLSHVVDNTVLKEARKEDILATANLAMRCLRLNGKKRPTMKEVSAELEALRKVQSFLYIKDDHKKPSDGQLFEHSTNVISQESTVESFSLSSQMESTSF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi277g00027 674 ProSiteProfiles Protein kinase domain profile. 352 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi277g00027 674 Gene3D LysM domain 186 238 IPR036779 -
Vivi277g00027 674 Pfam LysM domain 189 218 IPR018392 -
Vivi277g00027 674 Pfam LysM domain 123 168 IPR018392 -
Vivi277g00027 674 FunFam Wall-associated receptor kinase 2 323 427 - -
Vivi277g00027 674 CDD LysM 188 217 IPR018392 -
Vivi277g00027 674 CDD STKc_IRAK 358 625 - -
Vivi277g00027 674 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 107 632 IPR045274 GO:0007166
Vivi277g00027 674 Gene3D Transferase(Phosphotransferase) domain 1 428 643 - -
Vivi277g00027 674 Gene3D Phosphorylase Kinase; domain 1 325 427 - -
Vivi277g00027 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Vivi277g00027 674 SUPERFAMILY LysM domain 187 221 IPR036779 -
Vivi277g00027 674 Pfam Protein kinase domain 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi277g00027 674 SMART LysM_2 122 168 IPR018392 -
Vivi277g00027 674 SMART LysM_2 188 238 IPR018392 -
Vivi277g00027 674 SUPERFAMILY Protein kinase-like (PK-like) 335 622 IPR011009 -
Vivi277g00027 674 SMART serkin_6 352 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi277g00027 674 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Vivi277g00027 674 ProSiteProfiles LysM domain profile. 187 237 IPR018392 -
Vivi277g00027 674 FunFam Wall-associated receptor kinase 2 428 643 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi277g00027 272 626 Receptor kinase-like Gene Family AT1G16130 56.983 1.43e-143 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vivi277g00027 Pkinase 7.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi277g00027 - - gmx:100792803 994.571