Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi277g00026 ATGGAGCTTCAATATTTCTACATTCTTCATCTCACTGTCATGTTCCTGAGTATGTTTCCTCAGTTAGTCAACTGCCAACAAGAATACCTCAATATCACTGTCTTTGACTGCACTAACAACCCTTCTGTACCAAAAGGATACCTCTGCAATGGCCTTAAAAAGTCATGCACTTCCTTTTTAGTTTTCAAGTCAAAACCTCCCTATGACAAACCTGCAAAAATTGCCAACCTTCTTGGATCTGAAGCCTCTACTATAGCCTCGATCAACAAGATAACCATAAATGAGAAGATTCCTTCAAATAAATCAATCTTTGTCCCGGTTTTTTGTTCATGTGCTGGAAATATCTACCAGCATAGCACATCTTACTCTGTCAAGCAGAATGACACCTATTATGAGTTGGTAAAAGAAACTTATCAAGGCCTTACAACCTGCCAGGCATTGATGGGTCAGAATTACTATGCTCCTGTCAACATTGCAGTTGGTGCAGAGCTTACAGTTCCAGTACTATGTGCTTGTCCAACAAAAAACCTGACGGCAAAAGGTGTTACCTCCTTGCTAGTTCACATGGTGAACTACGGTGACACGGTTAAATCCATAGGAGAAGCTTATGGTGTTGATGAACCTAGCATGCGAGAGGCCAATGAGTTGCCGGTGCTACAAAGTGCAAACAACACTGTGATCCTCTTTGCTTTGACGCCTATAATAGTTCCTCTGAGAAGCAAGAGTTGTAAAGAGAACCCAGAGAGATTCTATTGCAAATGCTTTGAGGAACTGCATGCTGATGGAAGCTCCAAGGGTGTCTTCTGTGATGAATCTCATCGTCAAAAAATTCCTGCAAAATTGGTTGCTGCCTCAGGTATTGGAATTGGTACAGGCTTTCTGTGTTTGTTTCTTTTGGGTTACAAATTATATCAATGCATAATGAAAAAGAGAGAAAGAACCCGAAAGGAGAGGCTGTTCGGGCAAAACGGTGGCTACTTGTTACAAGAGAAGTTATCATCATACGGAAACGGAGAAATGGCAAAGCTTTTTACTGCAGAGGAGCTGCAAAGAGCAACAGATAACTATAACCGAAGTAGGTTTCTTGGCCAAGGTGGCTATGGCACGGTGTACAAAGGAATGCTACCCGATGGAACCATAGTAGCAGTTAAAAAGTCTAAACAGCTTGACAGGAACCAGATAGAAACTTTTGTCAATGAAGTAGTCATCTTATCTAACATCAACCACAGGAACATCGTCAAACTCTTAGGTTGTTGTCTTGAGACAGAAACCCCAATACTTGTTTACGAATTTATTCCGAACGGCACTCTTTCCGAACATATACATAGGAAAGACCATGAGTCGTCCCTTTCATGGGAAAATCGCCTTAGAATTGCTTGTGAAGTTGCTGGAGCAGTGTCATATATGCATTTTTCAGCATCTATTCCAATCTTCCATAGAGACATCAAACCCACCAACATACTTTTAGAGAGTAACTATAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAATACCAATGGATAAGACCCACCTAACCACATTTGTAGGTGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCCAGTCAATTTTCAGATAAGAGTGATGTATATAGTTTCGGTGTTGTTCTTGTAGAGATTATAACCGGCAGAAAGCCCAATTCATTCTATGACGAAGATGATGGTCAGAATTTGATTGCACAATTCATTTCTGTAACGAAAGACAACCAACTTCCTCAAATTGTAGATTCTAGAGTGCAAAAGGAAGCCGGGAAAGACACCATTCTTACTATTTCAAATCTCGCAATGAGGTGTTTGAGACTTAATGGTAAGAAAAGACCAACAATGAAAGAGGTTTCAGCAGAATTAGAAGCACTGAGAAAGGCACAAAGTTCCTTTCAAATCAAGCATGATCGTGATGAATCATCAAGTGATGATGAACACTCATTTGGGCACATAATCAATGAAACAACAGACCAAGAATCAACAGAAGAAAGCATTTCAGTTTCCTTACAAATCGAATCCGCGTCCTTCTGA 2046 0.4027 MELQYFYILHLTVMFLSMFPQLVNCQQEYLNITVFDCTNNPSVPKGYLCNGLKKSCTSFLVFKSKPPYDKPAKIANLLGSEASTIASINKITINEKIPSNKSIFVPVFCSCAGNIYQHSTSYSVKQNDTYYELVKETYQGLTTCQALMGQNYYAPVNIAVGAELTVPVLCACPTKNLTAKGVTSLLVHMVNYGDTVKSIGEAYGVDEPSMREANELPVLQSANNTVILFALTPIIVPLRSKSCKENPERFYCKCFEELHADGSSKGVFCDESHRQKIPAKLVAASGIGIGTGFLCLFLLGYKLYQCIMKKRERTRKERLFGQNGGYLLQEKLSSYGNGEMAKLFTAEELQRATDNYNRSRFLGQGGYGTVYKGMLPDGTIVAVKKSKQLDRNQIETFVNEVVILSNINHRNIVKLLGCCLETETPILVYEFIPNGTLSEHIHRKDHESSLSWENRLRIACEVAGAVSYMHFSASIPIFHRDIKPTNILLESNYSAKVSDFGTSRSIPMDKTHLTTFVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVEIITGRKPNSFYDEDDGQNLIAQFISVTKDNQLPQIVDSRVQKEAGKDTILTISNLAMRCLRLNGKKRPTMKEVSAELEALRKAQSSFQIKHDRDESSSDDEHSFGHIINETTDQESTEESISVSLQIESASF 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi277g00026 681 FunFam Wall-associated receptor kinase 2 432 649 - -
Vivi277g00026 681 SMART serkin_6 356 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi277g00026 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Vivi277g00026 681 CDD STKc_IRAK 362 629 - -
Vivi277g00026 681 ProSiteProfiles Protein kinase domain profile. 356 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi277g00026 681 Gene3D Phosphorylase Kinase; domain 1 338 431 - -
Vivi277g00026 681 Pfam Protein kinase domain 356 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi277g00026 681 Pfam LysM domain 188 216 IPR018392 -
Vivi277g00026 681 Gene3D Transferase(Phosphotransferase) domain 1 432 654 - -
Vivi277g00026 681 MobiDBLite consensus disorder prediction 635 657 - -
Vivi277g00026 681 FunFam Wall-associated receptor kinase 2 327 431 - -
Vivi277g00026 681 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Vivi277g00026 681 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 143 637 IPR045274 GO:0007166
Vivi277g00026 681 MobiDBLite consensus disorder prediction 658 681 - -
Vivi277g00026 681 MobiDBLite consensus disorder prediction 635 681 - -
Vivi277g00026 681 SUPERFAMILY Protein kinase-like (PK-like) 339 626 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi277g00026 286 633 Receptor kinase-like Gene Family AT1G16130 56.286 1.64e-138 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vivi277g00026 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi277g00026 - - gmx:100792803 1038.87