Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi276g00067 ATGTCTAACACCGACGGAACTCCAACAACCACTAACGGCTCCATCATTGACCCTCACCGTCAACAGTTAGCCGTCAAGAAACCGCCGTCAAAAGACCGTCACAGCAAAGTAGACGGCCGAGGCCGCCGTATTCGCATGCCAATCATTTGCGCCGCACGCGTCTTCCAACTCACCCGCGAATTAGGTCACAAATCCGATGGTCAAACCATCGAGTGGCTCCTCCGTCAAGCCGAACCCTCCATCATCGCCGCCACCGGGACCGGAACTACTCCGGCGAGTTTCTCCTCTCTCTCCGTTTCACTTCGTGGCTCCAATAATTCTCTCCCCTCTCCTTCCTCCACTTCGCTTGACCATAAACCGCTTCTCTCTCCCTCTCCTTTCATTCTCGGGAAACGTATACGCACCGATGACGATTCGTCTTCTCCGTCGGGGAACAACGCGAAAGACGACGCGCTTTCTGTTGCTTCTCTTTCTACACCGGCTGCTCTTTGGGCGTTACCTACACGGCCTGATTTTGGTCAAATTTGGAGCTTCGCTGCCGCGGCTGCTGCTGCTCCTCCGCCGGAAATGGTAGTTCAGTCTATGTCTCAGCAGCAGCATCAGCATCAAGCGAATTTCTTCGCTCATCATCATCATCAGCAACAGCAGCAACAAGCTATGGGAGAAGCTTCGGCTGCTAGAGTTGGGAATTATCTTCCTGGACATTTGAATTTGCTTGCTTCCTTGTCTGGTGGACATGGAAATTCCGGTCGGAGAGACGATGAACATCATTGA 774 0.5297 MSNTDGTPTTTNGSIIDPHRQQLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSVSLRGSNNSLPSPSSTSLDHKPLLSPSPFILGKRIRTDDDSSSPSGNNAKDDALSVASLSTPAALWALPTRPDFGQIWSFAAAAAAAPPPEMVVQSMSQQQHQHQANFFAHHHHQQQQQQAMGEASAARVGNYLPGHLNLLASLSGGHGNSGRRDDEHH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi276g00067 257 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 230 IPR005333 GO:0003700
Vivi276g00067 257 MobiDBLite consensus disorder prediction 24 42 - -
Vivi276g00067 257 MobiDBLite consensus disorder prediction 99 120 - -
Vivi276g00067 257 MobiDBLite consensus disorder prediction 99 151 - -
Vivi276g00067 257 MobiDBLite consensus disorder prediction 23 42 - -
Vivi276g00067 257 ProSiteProfiles TCP domain profile. 30 84 IPR017887 -
Vivi276g00067 257 Pfam TCP family transcription factor 30 217 IPR017887 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi276g00067 5 255 TCP Transcription Factor Family AT5G23280 63.672 1.69e-97 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi276g00067 TCP 2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi276g00067 K16221 - qsa:O6P43_020036 313.153