Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi276g00005 ATGCACCAGGAGGCTCTCACTAAGGCTCTTCCAGGAGACAATTTCGGATTCAATGTTAAGAATGTTGTTGTCAAGGATCTCAAGTGTGGTTTTGTTGCATCCAACTACAAGGATGACCCTGCCAAGGAAGCTGCCAACTTCACTTCCCAAATTGACAGACGATCCGGTAAGGAGATTGAGAAGGAGCCAAAGCTTTTGAAGAATGGGGATGCATGTATGGTTAAGATGATTCCAACAAAGCCCATGGTGGTGGAAACTTTTGCCGAGTATCCTCCTCTTGGTCATTTTGCTGTGAGGGACATGAGACAACAACTAAGGACGTTGCCAATAGTATTGTCATTTTGTTTTAATGATTACTCTCATAACTGTCCTTGA 375 0.4347 MHQEALTKALPGDNFGFNVKNVVVKDLKCGFVASNYKDDPAKEAANFTSQIDRRSGKEIEKEPKLLKNGDACMVKMIPTKPMVVETFAEYPPLGHFAVRDMRQQLRTLPIVLSFCFNDYSHNCP 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi276g00005 124 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 45 103 IPR009001 -
Vivi276g00005 124 PANTHER ELONGATION FACTOR 1 ALPHA 50 104 - -
Vivi276g00005 124 Pfam Elongation factor Tu C-terminal domain 44 103 IPR004160 -
Vivi276g00005 124 Gene3D Translation factors 38 111 - -
Vivi276g00005 124 Gene3D Translation factors 1 37 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi276g00005 1 105 Eukaryotic Initiation Factors Gene Family AT5G60390 62.857 4.78e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi276g00005 K03231 - vvo:131628064 248.825