Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi273g00047 | ATGGAGAAGAAAGCAGTAGCTGCCTTGTCCTTCCTCTTCCTCGTTCTCTTTGTTGCACAAGAAATAGCGGTGACTGAAGCAAAAACTTGTGAGAATCTGTCTGACACATTCAAGGGACCATGCATCCCAGATGGTAACTGTAACAAGCATTGCAAGGAGAAAGAGCACTTACTTAGTGGCAGGTGCAGGGATGATTTTCGCTGTTGGTGCACTAAAAACTGTTAA | 225 | 0.4444 | MEKKAVAALSFLFLVLFVAQEIAVTEAKTCENLSDTFKGPCIPDGNCNKHCKEKEHLLSGRCRDDFRCWCTKNC | 74 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi273g00047 | 74 | PANTHER | DEFENSIN-LIKE PROTEIN 1 | 1 | 74 | - | - | |
| Vivi273g00047 | 74 | Pfam | Gamma-thionin family | 28 | 74 | - | - | |
| Vivi273g00047 | 74 | CDD | Knot1 | 39 | 71 | IPR003614 | GO:0006952 | |
| Vivi273g00047 | 74 | Gene3D | - | 28 | 74 | IPR036574 | - | |
| Vivi273g00047 | 74 | SMART | gth_4 | 29 | 74 | IPR003614 | GO:0006952 | |
| Vivi273g00047 | 74 | SUPERFAMILY | Scorpion toxin-like | 28 | 74 | IPR036574 | - | |
| Vivi273g00047 | 74 | ProSitePatterns | Gamma-thionins family signature. | 28 | 51 | IPR008176 | GO:0006952 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi273g00047 | 1 | 74 | Plant Defensins Gene Families | AT5G63660 | 44.000 | 1.96e-11 | 52.4 |