Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi268g00015 ATGGGGATAGCAACAACTTCATCACTTTCTTCACCTTTCTCAAATTCATCAAACACACAAAATTTCCATTCAGTCTTAGAAAAGTCTCAAATCTCAACCAATTCTATGTCACAAGATTATCAGCACCAGCACCAGCACCACCAGAGCCACCACCAACAAGGAGTCTTTGGTTTCTCGAACGGATTCGAGAGATCAAACACTCCGGTGGAAGACAACAGTCCACACCACCACCAAAACCAACAAATTCAAAGAGACAAATTGAGACTTCAAGGCTTCGACTCACAACAACAACCACCACTGCAACAACCACCACCGTCGCTAATAGACAACATAGAAGAAGAACAAGAAGCTCTCCCGGTTTACGAAACAACCGGAATGTTGTCGGAAATGTTCAATTTCCCTCACGGCGCCTCATCTGCAGCTGAATTATTAGAGCAGCAACAACAAATGGCGTCAACTGCGTCGTTCCGTTCCTCATCAAGAACACCACCACCACAACCACATGGAATAGCCAATTCCAGTGACTGGTACGGAAACAGACAAACGATTTTAACAGATTCGAAAAACCATCTTCAAAATAACCGTGACAGTAGCAGCAGCAGTAGCCTATTTCATCATCAACAGAATCATCAGATGTCAAACATAAATGCTGAGTCAGCAGCAGCCATGCAACTTTTTCTGATGAATCCTCAAACTACCAGATCTCCATCTCCTCCTCCACCTCAACCTCATCATCCTTCATCTACAAATTCATCCACTCTTCACATGCTTCTTCCCAATCCTTCAACTACTAATCTCCAAGGCTTTAATTCCGGAGCCGGAGGGTCTTTCGGTCAATTCACATGGGGACATGGAAGTACTCAAGAAGGAGGAGCAACAACAAGTCATCACCAACTCAACAACAACCAACCTGAGATTGGAAGTGTTGTTGAAGGACAAGGTCTTTCATTGTCTTTATCTTCATCCTTACAACACCACCACTCCAACGAATTACGAATGGGTGATGCAGCCGGATTTCTATATTACAATCAAGGAGGACCAGGACCGGGACCGGGACCAGGACCTTCTTACAAGAATCTTCATCATCATCATTTACAAGGAGCCGGATTAGGACAAATTAGCCATATTCATCAAGGACATGTGGGATACGGTTCATCTTCTTCTTCGTCTTTAGGTGTTGTTAATGTTTTAAGAAATTCAAAGTATGTTAAAGCAGCTCAAGAATTACTTGAAGAATTTTGTAGTGTTGGAAGGGGCCAATTCAAGAAGAATAAATTTAATAGACAATTATCAAACCCTAATTCAAATCAAGGTGGTGGTAGTCTTGGGGGTGCTGCTTCTTCATCATCATCAAAAGATGTTTCACCTTTGTCACCTGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTAACCATGCTTGACGAGGTGGATAGAAGATACAGTCACTATTGTGAACAAATGCAAATGGTGGTGAACTCGTTTGATTTAGTGATGGGATTTGGTGCTGCAGTTCCATACACAGCGCTAGCGCAGAAAGCGATGTCGCGGCATTTTAGGTGTTTGAAGGATGCAATAGCAGCACAGTTGAAACATAGTTGTGAGTTATTGGGAGAGAAAGATGGTGTGGGGTCATCTGGATTGACGAAAGGAGAGACACCGAGGCTTAAGCTGCTTGAACAAAGCTTGAGACAGCAAAGGGCGTTTCATCAGATGGGGATGATGGAACAGGAAGCTTGGAGACCACAGAGAGGATTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTTGAACATTTTCTTCATCCGTACCCAAGTGATGCAGATAAGCATCTCTTAGCAAGACAGACTGGCCTTTCCAGAAATCAGGTATCAAACTGGTTCATAAATGCCAGGGTTCGGTTGTGGAAACCCATGGTAGAAGATATGTACCAACAAGAACTTAAAGAAGCAGAAGGATCTTCAGAAGGTGAAGAAGATAGAGAGAACAAGAATCAAAGCAGTACTAGCAACACCAACAACAACAACACTAGTGGTCACATAGCTACTACAACAACAACAATTGCACAAACTCCAACACCTTCAACAACAACAGCATCTCCAACAACAACAACACCACAACCTACAAGCAACAACAACAATAATAAGAGATCCAATATTATGAATGCCAATACTGAAAACGACCCATCACTTACACCAATAATAAATAGACAAGGCTTCTCGGAAAACCAAGCAATATTGTTACAACAACAATCAACCACCAAAACCACCGTCTCTCAAGTTGCACCACCTATCTCCGATTCTATGGCCATCGATGACACGTGTCGACATGGCAGCTTTGTTACAGCGGAATATGGGACCACGCCTGCTTCTTCTTCGGACAATATTATCAGATTTGGGACCACTGCCTCTGGTGATGTGTCACTCACTTTAGGGCTACGTCACGCCGGAAATTTGCCCGACAAAACTACTTTCTCTCTTACAGACTTTGGAGGCATTTAA 2514 0.4312 MGIATTSSLSSPFSNSSNTQNFHSVLEKSQISTNSMSQDYQHQHQHHQSHHQQGVFGFSNGFERSNTPVEDNSPHHHQNQQIQRDKLRLQGFDSQQQPPLQQPPPSLIDNIEEEQEALPVYETTGMLSEMFNFPHGASSAAELLEQQQQMASTASFRSSSRTPPPQPHGIANSSDWYGNRQTILTDSKNHLQNNRDSSSSSSLFHHQQNHQMSNINAESAAAMQLFLMNPQTTRSPSPPPPQPHHPSSTNSSTLHMLLPNPSTTNLQGFNSGAGGSFGQFTWGHGSTQEGGATTSHHQLNNNQPEIGSVVEGQGLSLSLSSSLQHHHSNELRMGDAAGFLYYNQGGPGPGPGPGPSYKNLHHHHLQGAGLGQISHIHQGHVGYGSSSSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKNKFNRQLSNPNSNQGGGSLGGAASSSSSKDVSPLSPADRIEHQRRKVKLLTMLDEVDRRYSHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAIAAQLKHSCELLGEKDGVGSSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGSSEGEEDRENKNQSSTSNTNNNNTSGHIATTTTTIAQTPTPSTTTASPTTTTPQPTSNNNNNKRSNIMNANTENDPSLTPIINRQGFSENQAILLQQQSTTKTTVSQVAPPISDSMAIDDTCRHGSFVTAEYGTTPASSSDNIIRFGTTASGDVSLTLGLRHAGNLPDKTTFSLTDFGGI 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi268g00015 837 SMART HOX_1 582 646 IPR001356 GO:0003677
Vivi268g00015 837 SMART prehox3 391 530 IPR006563 -
Vivi268g00015 837 MobiDBLite consensus disorder prediction 145 210 - -
Vivi268g00015 837 MobiDBLite consensus disorder prediction 1 20 - -
Vivi268g00015 837 MobiDBLite consensus disorder prediction 30 84 - -
Vivi268g00015 837 SUPERFAMILY Homeodomain-like 584 649 IPR009057 -
Vivi268g00015 837 Gene3D - 585 647 - -
Vivi268g00015 837 MobiDBLite consensus disorder prediction 50 76 - -
Vivi268g00015 837 Pfam Homeobox KN domain 599 638 IPR008422 GO:0003677|GO:0006355
Vivi268g00015 837 MobiDBLite consensus disorder prediction 426 456 - -
Vivi268g00015 837 MobiDBLite consensus disorder prediction 426 461 - -
Vivi268g00015 837 MobiDBLite consensus disorder prediction 652 669 - -
Vivi268g00015 837 Pfam Associated with HOX 396 529 IPR006563 -
Vivi268g00015 837 FunFam BEL1-like homeodomain protein 4 585 647 - -
Vivi268g00015 837 CDD homeodomain 582 643 IPR001356 GO:0003677
Vivi268g00015 837 MobiDBLite consensus disorder prediction 230 255 - -
Vivi268g00015 837 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 247 672 - -
Vivi268g00015 837 MobiDBLite consensus disorder prediction 652 734 - -
Vivi268g00015 837 ProSiteProfiles 'Homeobox' domain profile. 579 642 IPR001356 GO:0003677
Vivi268g00015 837 MobiDBLite consensus disorder prediction 670 734 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi268g00015 391 837 Homeobox Transcription Factor Family AT2G23760 53.785 9.78e-153 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Vivi268g00015 POX 9.1e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi268g00015 - - mtr:11411247 1152.12