Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi267g00019 ATGACATGGTGCAATGAGTCTGATGTTAATGATCACATAAAGCTCAATGAAGAATTTCAAACAATAAAATGCCCCTCATGTGGCCATGATATTGAAGTGAAAAATCAGGGTGGAAATGGAATTCATGATTTGCCTGGTTTACCAGCTGGAGTGAGATTTGATCCAAATGACATAGAAATATTAGAGCATTTAGAGGCAAAAGTGATGTCTAATATGTGCAAGATTCATCCACTTATTGATGAGTTTATTCCAACACTTCAAGGAGAAAATGGAATCTGTTATACACATCCAGAAAAACTACCAGGAGTTAGCAAAGATGGACAAATCCGTCATTTTTTTCATAGGCCATCTAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCACACCGACGAAGAAGGAGGCGAAACAAGATGGCACAAAACAGGGAAAACTAGAGCAATTTTTGTTAATGGCATTGTCAAGGGTTTTAAAAAGATACTAGTACTCTACACAAACTATAGCAAGCAAGGAAAACCAGAAAAGACTAATTGGGTGATGCATCAATACCATCTTGGTAGCAATGAAGAAGAAAAAGATGGAGAATTAGTTGCTTCAAAGGTGTTTTACCAAACACAACCAAGACAAAGTGGTAACTCCATTAATGTAAGAGATTCATATGAGAAAATAATTAACAAAGGAAGTGGTCATAGTAATAGTACAACACCTAACAGTTTAGGTATGGTGGAATGCTACAATGGTTCTTATACAAATTATGAGCATGTCCATGTTGGTCATCATAGGGAAAGCTTGCCACAATTTACTACAATGGATGCAAACAAAGTAAGAGTGCAGGAGAGAAAGTAA 852 0.3638 MTWCNESDVNDHIKLNEEFQTIKCPSCGHDIEVKNQGGNGIHDLPGLPAGVRFDPNDIEILEHLEAKVMSNMCKIHPLIDEFIPTLQGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGGETRWHKTGKTRAIFVNGIVKGFKKILVLYTNYSKQGKPEKTNWVMHQYHLGSNEEEKDGELVASKVFYQTQPRQSGNSINVRDSYEKIINKGSGHSNSTTPNSLGMVECYNGSYTNYEHVHVGHHRESLPQFTTMDANKVRVQERK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi267g00019 283 SUPERFAMILY NAC domain 42 206 IPR036093 GO:0003677|GO:0006355
Vivi267g00019 283 ProSiteProfiles NAC domain profile. 47 206 IPR003441 GO:0003677|GO:0006355
Vivi267g00019 283 FunFam NAC domain-containing protein 73 56 210 - -
Vivi267g00019 283 Gene3D NAC domain 57 210 IPR036093 GO:0003677|GO:0006355
Vivi267g00019 283 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 17 227 IPR044799 GO:0003700
Vivi267g00019 283 Pfam No apical meristem (NAM) protein 48 187 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi267g00019 1 216 NAC Transcription Factor Family AT4G28500 67.532 6.33e-109 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi267g00019 NAM 9.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi267g00019 - - gmx:100809389 427.557