Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi267g00017 ATGGCGGCCGCTGTTGTTGGTGAAGCTTTTCTCTCTGCTTTCATTGAAGTTGTCCTTGACAGACTTGCTTCTCATCAGGTTGTTGACTTGATCCGTGGGAAGAAACTTGACGTCAATTTGGTTCAACGGTTGAAGAACACTCTTTATGCTGTTGAAGCCGTGCTCAACGATGCTGAACAGAAGCAGATTCATGACTCTGCTGTTAACAAATGGCTTGATGATCTCAAAGATGCTCTCTATCTTGCTGATGACATTCTCGATCACATCTCTACCAAAGCTGCTCTTTCCAACAAGAACAACCAGGTCAGTACTGTTAACTACTTCTCTCGCTTTTTCAACTCTGAGGAAAGGGATATGGTTTGTAAGCTGGAAGATATAGTTGCTAAGATTGAATACATTCTCAATTTCAAAGATATTCTTGGCCTTCAACATATTGCAACTCATCACTCATCCTGGAGATCTCCATCAACCTCTTTACAAGACAGATCTAACATATTTGGTAGGGATCAAGACAAAGAGGCCATACTCAAATTACTGTTAGATGATGATGATGATGATCATAAGGATGAGATTTCTGTGATCCCTATAGTTGGTATGGGTGGAGTGGGAAAAACTACTTTAGCTCAATCTGTGTACAACCATGACACTATAAAGCAGAAATTCAATGTTCGAGCATGGGCTTGTGTTTCTGATCATTTTGATGAATTGAATGTTGCAAAGGCCATCTTGGAGTCAATTGTGGGGTATGCTTGTAGCACAGATAACAAAGAGTTGCTTCATCGTGATTTGAAGGAAAACCTGGCTGGAAAAAAGTTCTTAATTGTTTTGGATGATGTATGGACCGAGGATTATCACGGCTGGAATTCTCTTTTAAGGCCTCTTCAATATGGAGCTAAAGGAAGTAGAATTCTTGTAACAACCCGTATCCAAAAAGTTGCTTCTATGGTACAAACTAAACAAGATTACTCTCTTGAGAAATTGTCTGATGAAGATTGTTGGTCAGTGTTTGCAAACCATGCATGCCTTTCTCTAAAAGAATTCAGTGAGAATAAGAATCTCCATAGAATTGGCAAAGAGATTGTTAGAAAATGCAAGGGATTGCCTTTAGCAGCACAATCACTTGGGGGCTTGTTGCGAAGTAAACGGGACATCAAGGATTGGGATGATATACTAAGTAGTAACATTTGGGAAAATGAGAGTAATATCATTCCAGCTCTAAGAATTAGTTATCATTATCTCCCTCCTTATTTGAAACGCTGCTTTGTTTATTGTTCCTTGTATCCTAAGGATTATGAATTTGAAAAAGATGAACTGGTTTTGTTGTGGATGGCCGAGGATCTTTTACATCCTTCAGAAAATAACAAGACTTTAGAAGAAGTTGGTCATGGGTATTTTAATGACTTAGCTTCTAGATCATTTTTTCAACGTTCGGGAAATGGGAACAGCTACCAGCATTTTGTGATGCATGATCTGGTGCATGACTTAGCAATATTGCTCGGTGGAGATTTCTATTTTAGAACAGAAAAACTTGGGAAAGAATCGAAGATTGGCACCATGACCCGTCATTTATCATTTAGAAGCTTCAGTGGTCCAGTCTTGGAAAACTTTGATATTTTTGGCCGAGCAAAACATCTTAGGACATTTTTGACAAACAATTTTAAACTCCCTTCTTCCAATATCGAAAAGGCATCATGCATCATTTTATCCACATTGAAGAGCTTGAGAGTTTTGTCATTTCACTACTCTCCATATCTTGATGCATTGCCCGATTCGATATGTGAACTGATCCATTTGCGTTACTTGGATCTCTCTTCCACGACAATTAAAACATTACCAGAGTCACTGTGTAATTTGTATAATCTACAAACGTTGAGGTTGTGCAATTGTCTTGAACTAACCTTGCTTCCCAATGATATGCAAAATCTTGTAAATTTGCGCCATCTTGATATCCGTGGAAGTGATAAGTTAGAAGAAATGCCTGTTAGAATGAGCAAATTAAATCATTTGCATTATTTGAGTTATTTTGTTGTGGGAAAACATGAAGAGAAAGGGATCAAGGAACTGGGGACACTTTCAAATCTTCACGGATCACTTTCCATTAAGAAATTAGAGAATGTTACCAACAGCTTTGAAGCATCAAAGGCAAAGATAATGGATAAGAAGTACCTTGAAGAATTATCGTATGTATGGTCTCAAGATGCAAAGGACGATTTTAAGAATTCACAAAGCGAGATGGATATACTTGGCAATTTACAACCTACCAAGAACCTGAAAAGGCTACATATTGATGGATACAGGGGCACAAAATTTCCAGAATGGGTTGCAGATCCTTCCTACCACAATTTGACTGAGTTATCTTTCTATAATTGTCATAATTGTTGCATCCTGCCCCCACTAGAACAACTTCGCTGTCTTAAGAATTTGAGAATCAGTAAAATGAATATGATGATGGAGATTATTGGATCTGAATATAGTGATTCTTTTTCGGAGACACTTTTTCCTTCCCTTGAATATCTTGAGTTCCATGACATGCCTTGTTGGGAAGTGTGGCATCATCCCCATGAATCATATGCTCCCTTCCCTGTATTGAAGACCCTTTTGATTATTGATTGTCCTATGTTACGGGGAAATTTGCCATCTCATCTTCCTGCTTTGAAAGTACTTGTGATTGAACGATGCTACCAACTTGCTTCTTCTCTCCCGAGGTCCCTTGTCATAACTACACTAGTGGTGTGTGCAAGCAATAAAGTAGCACTACCAGAGCTGCTACCACTTTCATTAACAGAGTTAAAAACTCAAGGAAGAGCGGTAATAGAGTCCGTGTTTGAAGCCTTCAGAGTCTCCGTACCAACTTCTCTTCAAGATTTAGACATTGAGGATTGTTCATCTGCAATATCATTTCCGAGAGATTGTTTGCCCGCATCCTTGAAGCGCCTAACTATCAAGAATTGTGAAAATCTAGATTTCCCAATGCAAAACCACCAACTCGAGTCACTTGTGTATTTGTATATAAAAAGGAGTTGTGATTCTCTTAGAAACCTCCCATTGGAAACCTTTCCAAATCTTCAATATCTGGGTATCAAAAACTGTGAAAACATAGAATATCTTTCCACTTTGAAGAATCTTCAAAATCTCGTTGATATTGGTATTAGAGACTACCCCAATTTTGTACCATTCCTAGAAGAGGGGTTGTCTGCCCCAAACTTGAATACACTGCATGTCTCCTGCTGCGTTAATTTAAAGTCACTTCCTTGTCACATAGATACTCTTTTCCCAATGTTAGAAAATGTGACAATAGAAGATTGCCCAGAAATTGAGACTTTTCCTGAAGGGGGTATGCCGCCTAGCTTGAGAAAACTTCAGATCTTGAATTGTGAAAAATTATTGAGGAACCCATCGCTAACTTTGTTGGACATGCTTACCCATCTTTCCATTACTGATGGTGCTGAGTCCTTCCCCAAGGAGGGTTTTGCGTTGCTACCTCCATCCATTACCTCTCTTAAGCTATGGAGTATGTCAAATTTGCACACTGTTGAGTGTAGGGGGATTCTCCATCTCACGTCCCTCATAAAGTTAAAAGTTATAAACTGCCCCAAGCTGGAGAATATGGCGGGAGATAGACTACCTGCTTCTCTGCTAAAAATTCGAATCTATGAATGTCCTCTGCTGGAAGAACGGTGCCGCATGAAACACCCGCAAATTTGGCCCAAACTTTTTCACATTCCGGACATTAAGCTTGAACTTGGATTTTAA 3753 0.3909 MAAAVVGEAFLSAFIEVVLDRLASHQVVDLIRGKKLDVNLVQRLKNTLYAVEAVLNDAEQKQIHDSAVNKWLDDLKDALYLADDILDHISTKAALSNKNNQVSTVNYFSRFFNSEERDMVCKLEDIVAKIEYILNFKDILGLQHIATHHSSWRSPSTSLQDRSNIFGRDQDKEAILKLLLDDDDDDHKDEISVIPIVGMGGVGKTTLAQSVYNHDTIKQKFNVRAWACVSDHFDELNVAKAILESIVGYACSTDNKELLHRDLKENLAGKKFLIVLDDVWTEDYHGWNSLLRPLQYGAKGSRILVTTRIQKVASMVQTKQDYSLEKLSDEDCWSVFANHACLSLKEFSENKNLHRIGKEIVRKCKGLPLAAQSLGGLLRSKRDIKDWDDILSSNIWENESNIIPALRISYHYLPPYLKRCFVYCSLYPKDYEFEKDELVLLWMAEDLLHPSENNKTLEEVGHGYFNDLASRSFFQRSGNGNSYQHFVMHDLVHDLAILLGGDFYFRTEKLGKESKIGTMTRHLSFRSFSGPVLENFDIFGRAKHLRTFLTNNFKLPSSNIEKASCIILSTLKSLRVLSFHYSPYLDALPDSICELIHLRYLDLSSTTIKTLPESLCNLYNLQTLRLCNCLELTLLPNDMQNLVNLRHLDIRGSDKLEEMPVRMSKLNHLHYLSYFVVGKHEEKGIKELGTLSNLHGSLSIKKLENVTNSFEASKAKIMDKKYLEELSYVWSQDAKDDFKNSQSEMDILGNLQPTKNLKRLHIDGYRGTKFPEWVADPSYHNLTELSFYNCHNCCILPPLEQLRCLKNLRISKMNMMMEIIGSEYSDSFSETLFPSLEYLEFHDMPCWEVWHHPHESYAPFPVLKTLLIIDCPMLRGNLPSHLPALKVLVIERCYQLASSLPRSLVITTLVVCASNKVALPELLPLSLTELKTQGRAVIESVFEAFRVSVPTSLQDLDIEDCSSAISFPRDCLPASLKRLTIKNCENLDFPMQNHQLESLVYLYIKRSCDSLRNLPLETFPNLQYLGIKNCENIEYLSTLKNLQNLVDIGIRDYPNFVPFLEEGLSAPNLNTLHVSCCVNLKSLPCHIDTLFPMLENVTIEDCPEIETFPEGGMPPSLRKLQILNCEKLLRNPSLTLLDMLTHLSITDGAESFPKEGFALLPPSITSLKLWSMSNLHTVECRGILHLTSLIKLKVINCPKLENMAGDRLPASLLKIRIYECPLLEERCRMKHPQIWPKLFHIPDIKLELGF 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi267g00017 1250 Gene3D - 409 497 IPR036388 -
Vivi267g00017 1250 Coils Coil 41 61 - -
Vivi267g00017 1250 SUPERFAMILY L domain-like 910 1236 - -
Vivi267g00017 1250 Gene3D - 149 323 IPR027417 -
Vivi267g00017 1250 PRINTS Disease resistance protein signature 640 656 - -
Vivi267g00017 1250 PRINTS Disease resistance protein signature 364 378 - -
Vivi267g00017 1250 PRINTS Disease resistance protein signature 266 280 - -
Vivi267g00017 1250 PRINTS Disease resistance protein signature 193 208 - -
Vivi267g00017 1250 FunFam Probable disease resistance protein At1g63360 410 498 - -
Vivi267g00017 1250 SUPERFAMILY L domain-like 487 903 - -
Vivi267g00017 1250 PANTHER DISEASE RESISTANCE PROTEIN RP 43 929 IPR044974 GO:0006952
Vivi267g00017 1250 Pfam Rx N-terminal domain 10 100 IPR041118 -
Vivi267g00017 1250 Gene3D - 326 408 IPR042197 -
Vivi267g00017 1250 Gene3D - 15 131 - -
Vivi267g00017 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 424 IPR027417 -
Vivi267g00017 1250 Gene3D Ribonuclease Inhibitor 929 1234 IPR032675 -
Vivi267g00017 1250 Gene3D Ribonuclease Inhibitor 537 928 IPR032675 -
Vivi267g00017 1250 Pfam NB-ARC domain 170 392 IPR002182 GO:0043531
Vivi267g00017 1250 FunFam Probable disease resistance protein At1g61300 149 321 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi267g00017 190 673 WRKY Transcription Factor Family AT5G45050 23.238 1.20e-13 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi267g00017 - - vvo:131644921 1550.03