Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi267g00012 ATGGCGCTGGTTGCTGTTGGTGAAGCATTTCTCTCCGCTTTCACTGAAGTCGTCCTTGACAGGCTAGCTTCTCCTCAGGTTGTTGACTTCATCCGTGGAAAGAAAATTGACGTCAATTTGGTTCGACGATTAAAGAATACTCTTTATGCTGTTGAAGCTGTGCTTAGCGATGCTGAACAGAAGCAGATTCATGACTCTGCTGTTAACAACTGGCTTGATGATCTCAAAGATGCTCTCTATCTTGCTGATGACATTCTCGACCACATCTCTACCAAGGCTGCTCTTTCCAAGAAGAAGAATCAGGTGAGTACTGCTAATTACTTCTCTCACCTTTTCAACTTTGAAGAAAGGGATATGGTTCGTAAGCTGGAAGATATAGTTGCCAGACTTGAATCCATTCTCAAACTTAAAGATATTCTTGGTCTTCAACTTATTGCAACTCATCACTCATCCTGGAGAACTCCATCAACCTCTTTAGAAGACAGATCTGTCATTTTTGGTAGGGATCAAGACAAACAGGCCATACTCAAATTAATCTTACATGATGATGATAACACTGCTGTCATCCCCATTGTTGGCATGGGTGGCCTTGGAAAAACAACTTTAGCCCAATTTGTGTACAACCATGACAGTATAAAGAGCAAGTTTGATGTTCAAGCATGGGTTTGTGTTTCTGATGATTTCGATGTTTTGAAGGTTACCAAGTTCATCGCGGAGGAAGTGGAAAGTGCTTGTAACACAAATAACTTGAATATCCTTCATCGAGATTTGAAGGAAAAGCTGACCGGAAAGAGGTTCTTGATTGTTTTGGATGATGTCTGGACCGAGGATTACGACTCTTGGAATTATCTTTTAAAGCCTCTTCAGTATGGAACTATGGGAAGTAAAATTCTCGTAACTACCCGTATTGAAAAAGTTGCTTCGATGGTCCAAACTATTCAACCTTACTCTCTTCAGCAATTGTCTGATGAAGATTGTTGGTCTGTGTTTGCAAACAATGCTTGCCTTTCTTCAGTTGAATCCAGTGAGGATATGGATCTCCAAAAAATTGGCAAAGAGATTGTTAGGAAATGTAAGGGATTGCCTTTAGCTGCACAGTCACTTGGGCGCTTGTTGCGAGAAAAACGTGATATCAGGGATTGGAATAGTATACTGAATAATAATATTTGGGAGAATAAGAGTAAGATCATTCCAGCATTGAGAATTAGTTATCATTATCTCCCTCCGTATTTAAAACGTTGCTTTGTATATTGTTCATTGTTTCCCAAGGATTATAAATTTGATAGAGATGAGTTGATCTTGTTGTGGATGGCGGAGGATCTTTTACATCCATCGGAAAATAACAAGACTTTAGAAGAAGTTGGTTATGGGTATTTTAATGACTTAGTTTCCAAATCATTTTTTCAACATTCTGACAATGGGAACTTCAACCAACATTTTGTAATGCATGATCTTGTGCATGATTTGGCAACATGGCTTGGTGGAGAATTCTATTTTAGAACAGAAGTAATTGGGAAAGATACGAAGATTAGTATCAAGACTCGTCATTTGTCATTTTCCAAGTTCAGTGATTCAATCTCAACAAACTTTGATATTTTTGGCAGAATAAAATGTCTAAGAACAATCTCGCCAATCTATTTATGGAATGATCAATTCAACAAAGAAAAAGCGTCATGCTTCATTTTGTCAAATTTGAAGTACTTGAGAGTTTTGAAATTTGGCAACTTTGAAGGTCTTAATGCATTTCTTGATTCAATAGATGAACTAATCCATTTGCGTTATTTGGATCTGTCTTACACATCTATAAAAATGTTACCTGAGTCATTATGTAACCTGTATAATCTACAAACGTTAAAGTTGCACCACTGTAACAGTCTAACAAGGCTTCCCGATGACGTGCAAAATCTTGTAAATTTGCGCCATCTGGAAATTCGGGGAACTAGTTTAGAAGAGATGCCTAGAGAAATGAGCAAATTGATTAATTTGCAACATTTGGGTTGCTTTATTGTGGGAACGCAGGAAGAGAAAGGGATCAAGGAATTGAGAACACTTTCGAATCTTCACGGATCACTTTCCCTTAGGAAGTTAGAGAACGTGACCAACAACTTTGAAGCATCACAGGCAAAAATGATGGATAAAAAGTACCTTGATAATTTATCGTTTGTATGGTCTGAAGATGCAAAGAACCATTTTACAAGTTCACAAAGTGAGATGGATATACTTGGAAAGTTACAACCTTCCATGAACCTGAAAAGGCTAGATATTCATGGATACAGGGGAACACTATTTCCAGAATGGGTTGGACATCCTTCCTACCAAAATTTGTCTAAGGTATTTCTGTCTGATTGTTTGAATTGTTGTATCCTTCCATCACTTGGACAATTATACTCTCTCAAGGACTTGACAATCAGTGAAATGAATATGCTGGAGACTATTGGATCTGAATATGATGATACCTTTTCAGGGACATACTTTCCTTCCCTTGAATATCTGCAGTTTGTCAAGATGTCATGTTGGAAAGTGTGGCATCATCCTCCTGAGTCAAATGCTTATTTTCCAGTATTGAAGTCTATTGTGATTAATGATTGTCCCATATTACATGGGGATTTGCCATCTTACCTTCCTGCTTTGGAAACAATTCATATTGAAGGATGCAACCAGCTTGTTTCTTCTCTCCCAAGGGCTCCTGCCATCTGCAATTTATCCATATTTGAAAGAAATAAAGTAGCCTTGAATGAGCTACCCCTTTCATTGGAACAGATATTTGTTGGAGGAAGAGAGGTGACAGAGTCTGTCTTTGAAGCCATTGCCAACACCCCACCAATTTCTCTTAAAATGTTAGTCATCAAGGATTGTTCTTCTACGATATCGTTTCCAAGAGATTGTTTACCCTTATCCTTAGAGAGTTTGTCCATCACTAATTCTAGTAATCTAGATTTCCCAAAGCAAAATCACGGCCATGAGTCACTTAAGTATCTTCGTATAGATAAGAGTTGTGATTCTCTCATAACTCTCCCACTGGACACCCTTCCTAACCTCCATAATCTGCATATCATCAACTGTGAAAACATAGAATGTCTTTCCGTTTCAAAGGTTCTTCAAAATCTCATTGATATTAAAATTCGTAACTGCCCCAAATTTGTATCATTCCCAAAAGAAGGACTGTCTGCACCCAACTTGACATCATTGTATGTCTCCAAGTGTGCCAATTTAAAATCACTGCCTTGTCACATAAATACTCTTCTCCCAAAGTTAGAAAGAGTGAGTATGCTTGATTGTCCAAAATTGGAGATGTTTCCTGAAGGGGGTATGCCGCCTAGCTTTAGAACAATTTTGATTGGGAATTGCGAAAAATTACTGACGAGCTCATCTCTAACTTCAATGAACATGCTTACCAGTCTTTCCATTCATGGTCCATGTGATGGTGTCGAGTACTTTCCAAAGAAGGGTTATGCATTGCTGCCTCCCTCCCTTACCTACCTGCATATATTTAACCATTCAAGTTTGCACACGTTGGATTGCACGGGGCTTCTCCACCTCACTTCCCTGCAAACATTTACAACTTTTTGCTGTCCCAAGCTGGAGAATATAGTGGGAGAAAGGCTGCCTGCCTCTTTAATAGAACTTAATATCTCTGCATGTCCTTTGCTGAAAGAACAACACCGCATGAAATACCCTCAAATTTCCCACATCCCTGGCATTAAAGTTAACGGAAAATGGATTTAG 3726 0.3859 MALVAVGEAFLSAFTEVVLDRLASPQVVDFIRGKKIDVNLVRRLKNTLYAVEAVLSDAEQKQIHDSAVNNWLDDLKDALYLADDILDHISTKAALSKKKNQVSTANYFSHLFNFEERDMVRKLEDIVARLESILKLKDILGLQLIATHHSSWRTPSTSLEDRSVIFGRDQDKQAILKLILHDDDNTAVIPIVGMGGLGKTTLAQFVYNHDSIKSKFDVQAWVCVSDDFDVLKVTKFIAEEVESACNTNNLNILHRDLKEKLTGKRFLIVLDDVWTEDYDSWNYLLKPLQYGTMGSKILVTTRIEKVASMVQTIQPYSLQQLSDEDCWSVFANNACLSSVESSEDMDLQKIGKEIVRKCKGLPLAAQSLGRLLREKRDIRDWNSILNNNIWENKSKIIPALRISYHYLPPYLKRCFVYCSLFPKDYKFDRDELILLWMAEDLLHPSENNKTLEEVGYGYFNDLVSKSFFQHSDNGNFNQHFVMHDLVHDLATWLGGEFYFRTEVIGKDTKISIKTRHLSFSKFSDSISTNFDIFGRIKCLRTISPIYLWNDQFNKEKASCFILSNLKYLRVLKFGNFEGLNAFLDSIDELIHLRYLDLSYTSIKMLPESLCNLYNLQTLKLHHCNSLTRLPDDVQNLVNLRHLEIRGTSLEEMPREMSKLINLQHLGCFIVGTQEEKGIKELRTLSNLHGSLSLRKLENVTNNFEASQAKMMDKKYLDNLSFVWSEDAKNHFTSSQSEMDILGKLQPSMNLKRLDIHGYRGTLFPEWVGHPSYQNLSKVFLSDCLNCCILPSLGQLYSLKDLTISEMNMLETIGSEYDDTFSGTYFPSLEYLQFVKMSCWKVWHHPPESNAYFPVLKSIVINDCPILHGDLPSYLPALETIHIEGCNQLVSSLPRAPAICNLSIFERNKVALNELPLSLEQIFVGGREVTESVFEAIANTPPISLKMLVIKDCSSTISFPRDCLPLSLESLSITNSSNLDFPKQNHGHESLKYLRIDKSCDSLITLPLDTLPNLHNLHIINCENIECLSVSKVLQNLIDIKIRNCPKFVSFPKEGLSAPNLTSLYVSKCANLKSLPCHINTLLPKLERVSMLDCPKLEMFPEGGMPPSFRTILIGNCEKLLTSSSLTSMNMLTSLSIHGPCDGVEYFPKKGYALLPPSLTYLHIFNHSSLHTLDCTGLLHLTSLQTFTTFCCPKLENIVGERLPASLIELNISACPLLKEQHRMKYPQISHIPGIKVNGKWI 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi267g00012 1241 FunFam Probable disease resistance protein At1g61300 150 314 - -
Vivi267g00012 1241 Gene3D - 403 491 IPR036388 -
Vivi267g00012 1241 SUPERFAMILY L domain-like 481 902 - -
Vivi267g00012 1241 SMART LRR_typ_2 636 659 IPR003591 -
Vivi267g00012 1241 SMART LRR_typ_2 612 635 IPR003591 -
Vivi267g00012 1241 SMART LRR_typ_2 589 611 IPR003591 -
Vivi267g00012 1241 Pfam Rx N-terminal domain 10 102 IPR041118 -
Vivi267g00012 1241 Coils Coil 41 61 - -
Vivi267g00012 1241 Gene3D - 149 314 IPR027417 -
Vivi267g00012 1241 PRINTS Disease resistance protein signature 610 626 - -
Vivi267g00012 1241 PRINTS Disease resistance protein signature 358 372 - -
Vivi267g00012 1241 PRINTS Disease resistance protein signature 188 203 - -
Vivi267g00012 1241 PRINTS Disease resistance protein signature 260 274 - -
Vivi267g00012 1241 Pfam NB-ARC domain 170 387 IPR002182 GO:0043531
Vivi267g00012 1241 Gene3D - 18 130 - -
Vivi267g00012 1241 Gene3D Ribonuclease Inhibitor 533 922 IPR032675 -
Vivi267g00012 1241 Gene3D Ribonuclease Inhibitor 961 1104 IPR032675 -
Vivi267g00012 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 418 IPR027417 -
Vivi267g00012 1241 PANTHER DISEASE RESISTANCE PROTEIN RP 44 885 IPR044974 GO:0006952
Vivi267g00012 1241 FunFam Probable disease resistance protein At1g63360 404 492 - -
Vivi267g00012 1241 SUPERFAMILY L domain-like 936 1222 - -
Vivi267g00012 1241 Gene3D - 320 402 IPR042197 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi267g00012 175 653 WRKY Transcription Factor Family AT5G45050 23.464 1.13e-12 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi267g00012 - - cam:101511364 1549.26