Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi267g00005 ATGGCTGCCGCAGCTGTTGGTGAAGCTTTTCTTTCTGCTTTCATTGAAGTCGTCCTCGACAGGCTATCATCTCCTCAGCTTGTTGACTTGGTCCGTAGGAAGAAACTTGACGTCAATTTGGTTCAACGGTTGAAGAACACTCTTTATGCTGTTGAAGCCGTGCTTAACGATGCTGAACAGAAGCAGATTCATGACTCTTCTGTTAACAAATGGCTTGATGATCTCAAAGATGCTCTCTATCTTGCTGATGACATTCTCGACCACATCTCCACCAAAGCTGTTCTTTCCAACAACAACAACAAGCAGGTGAGTACTGTTAACTACTTCTCTCGCTTTTTCAACTTTGAAGAAAGGGATATGGTTCGTAAGCTGGAAGATATAGTTGCTAGGCTGGAATACATTCTCAAGTTCAAAGATATTCTCGGTCTTCAACATATTGCAACTCACCACTCATCATGGAGAACTCCATCAACCTCTTTAGAAGACAGATCTATCATTTTTGGTAGGGATCATGACAAACAGGCCATACTCAAATTGCTCTTACATGATGATGATAAGACTGGTGTGATTCCCATTGTTGGCATGGGTGGCCTTGGAAAAACAACTTTAGCCCAATTTGTGTACAACCATGATGATATAAAGAGCAAATTTGATGTTAAAGCTTGGGTTTGTGTTTCTGATGATTTCGATGTTTTGAAGGTTACAAAGTTCATCGCCGAGGAAGTGGGAAGTACTTGTAGCACAAATAGCTTGAATATCCTTCATCGAGATTTGAAGAAAAAGCTGACCGGGAAGAGGTTCTTGATTGTTTTGGATGATGTCTGGACCGAGGATGACGACTCTTGGAATTCTCTTATAAAGCCTCTTCAATATGGAAGTATAGGAAGTAAAATTCTTGTAACTACCCGTAGTGAAAAAGTTGCGTCTATGGTTCAAACTTTTCAACCTTACTCTCTTCACCAATTGTCTGATAAAGATTGTTTGTCAGTGTTTGCGAACAATGTGTGCCTTTCTCCAGATGACAATATGGATCTCCGAAAAATTGGCAAAGAGATTGTTAGAAAATGTAAGGGATTGCCTTTAGCAGCTCAGTCACTTGGGCGCTTGTTGCGAGAAAAACGTGACATCAGGGATTGGAATAGTATACTGAATAATAATATTTGGGAGAATAAGAGTAAGATCATTCCAGCATTGAGAATTAGTTATCATTATCTCCCTCCCTATTTAAAACGTTGCTTTGTATATTGTTCATTGTTTCCCAAAGATTATCAATTTGATAAACATAAATTAATCTTGTTGTGGATGGCGGAGGATCTTTTACATCCTTCAGGAAATAACAAGACTTTAGAAGAAGTTGGTTATGGATATTTTAATGATTTAGCTTCCAAATCATTTTTTCAACATTCTGGTTATGGGTATTTTGTAATGCATGATCTTGTGCATGATTTGGCAACATGGCTTGGTGGAGAATTCTATTTTAGAACAGAAGTACTTGGGAAAGATACGAAGATTGGTGCCAAGACTCGTCATCTGTCATTTTCCAAGTTCAGTGATCCTATCTCAGCAAACTTTGATGTTTTCCGCAGAATAAAGTCTCTGAGAACAATCTCGCCAATCTATTCATGGGATGATCCATTCAACCAAGAAAAGGTGTCATGCTTCATTTTGTCAAATATGAAGTACTTGAGAGTTTTGAAATTTGGCAACTTTGAAGGTCTGGATGCATTTCTTAATTCAATAGATGAACTAATCCATTTGCGTTATTTGGATCTCTCTTCCACGTCTATAAAGATGTTACCTGAGTCATTATGTAACCTGTATAATCTACAAACGTTAAAGTTGTACAATTGTAAAAGGCTAACAAGGCTTCCCAATGACATGCAAAATCTGGTAAATTTGCGCCATTTGGAAATTCGGGGAACTAATTTAAAAGAGATGCCTAGAGAAATGAGCAAATTGATCAATTTGCAACGATTGGGTTGCTTTGTCGTGGGAACGCAGGAAGCGAAAGGGATCAAAGAATTGGGAACACTTTCGAATCTTCACGGATCACTTTCTGTTAGGAAGTTAGAGAACGTGACCAACAGCTTTGAAGCATCACAGGCAAATATAATGGATAAAATGTACCTTAATAAATTATCGTTTGTATGGTCTAAAGATGCAAAGAACCATTTTCAAAGTTCACAAAGTGAGATGGATATACTTGGAAAGTTACAACCTTCCAAGAACCTGAAAATGCTAGATATTGATGGATACAGGGGCACACTATTTCCAGAATGGGTTGGACATCCTTCCTACCAAAATTTGACTGAGGTATCTCTGTATGGTTGTTTGAATTGTTGTATCCTTCCATCACTTGGACAATTATGCTCTCTCAAGGTCTTGACAATCAGTAAAATGAATATGCTGGAGACTATTGGAACTGAATATGACAATACCTTTTCAGGGACATACTTTCCTTCCCTTGAACGTCTGGAGTTTTTTAAGATGTCATTTTGGAAAGTGTGGCATCATCCTCATGAGTCAAATGTTTATTTTCCAGTATTGAAGTCTATTGTGATTAATGATTGTCCCAGATTACATGGGGATTTGCCATCTTATCTTCCTGCTTTGGACACAATTCGTATTGAAGGATGCAACCAGCTTGTTTCTTCTCTCCCAAGGGCTCCTGCCATCCGCAGATTATACATATTTGAAAGCAATAATATAGCCTTGAATGAGCTACCCCTTTCATTGGAAGAGTTAGATGTTAAAGGAAGTGAGGTGACAGAGTCTGTCTTTGAAGCCATTACCATCACCCCACCAATTTCTCTTAAAAAATTAGTCATCAGGGATTGTTCTTCTGCAATATCGTTTCCAAGAGATTGTTTACCCTTATCCTTAGAGAGTTTGTCCATCACAAATTCTAGTAATCTAGATTTCCCAAAGCCAAATCACGGGCATGAGTCACTTAAGTATCTCTTTATAGATAGAAGTTGTGATTCTCTCATAACCCTCCCGCTGGATACCCTTCCCAACCTCCATCATCTGCGTATCGGCAACTGTGAAAACATAGAAAGTCTTTCCGTTTCAAAGGTTCTTCAAAATCTCGATGCTATTAACATTAGTGACTGCCCCAAATTTGTATCATTCCCAGGAGAAGGACTGTCTGCACCCAACTTGTCATCATTGTATGTCTCCAACTGTGTCAATTTAAAATCACTGTCTTGTCACATAAATACTCTTCTCCCAAAGTTAGTTAGTATGTCTATATATGAATGTCCAAAATTGGAGATGTTTCCTGAAGGGGGTATGCCGCCTAGCTTTAGAACAATTTTGATTGCGAATTGCGAAAAATTATTGATGAGCACATCTCTAACTTCAATGGACATGCTTACCCATCTTTGCATTGATGGTCCATGTGATGGTGTCGAGTACTTTCCAAAGAAGGGTTATGTATTGCTGCCTCCCTCCCTTATATACCTGCATATATATAACCATTCAAGTTTGCACACGTTGGATTGCACGGGGCTTCTCCACCTCACTTCCCTGCAAGCATTAATAATTAGATTGTGTCCCAAGCTGGAGAATATAGTGGGAGAAAGGCTGCCTGCTTCTCTAATAGAACTTAATATCTTTGAATGTCCTTTGCTGAAAGGACAGTACCGCGTGAAATACCCGCAAATTTCCCACATCCCTCGCATTGTAGTTGACAACAAATGGATTTAG 3708 0.3886 MAAAAVGEAFLSAFIEVVLDRLSSPQLVDLVRRKKLDVNLVQRLKNTLYAVEAVLNDAEQKQIHDSSVNKWLDDLKDALYLADDILDHISTKAVLSNNNNKQVSTVNYFSRFFNFEERDMVRKLEDIVARLEYILKFKDILGLQHIATHHSSWRTPSTSLEDRSIIFGRDHDKQAILKLLLHDDDKTGVIPIVGMGGLGKTTLAQFVYNHDDIKSKFDVKAWVCVSDDFDVLKVTKFIAEEVGSTCSTNSLNILHRDLKKKLTGKRFLIVLDDVWTEDDDSWNSLIKPLQYGSIGSKILVTTRSEKVASMVQTFQPYSLHQLSDKDCLSVFANNVCLSPDDNMDLRKIGKEIVRKCKGLPLAAQSLGRLLREKRDIRDWNSILNNNIWENKSKIIPALRISYHYLPPYLKRCFVYCSLFPKDYQFDKHKLILLWMAEDLLHPSGNNKTLEEVGYGYFNDLASKSFFQHSGYGYFVMHDLVHDLATWLGGEFYFRTEVLGKDTKIGAKTRHLSFSKFSDPISANFDVFRRIKSLRTISPIYSWDDPFNQEKVSCFILSNMKYLRVLKFGNFEGLDAFLNSIDELIHLRYLDLSSTSIKMLPESLCNLYNLQTLKLYNCKRLTRLPNDMQNLVNLRHLEIRGTNLKEMPREMSKLINLQRLGCFVVGTQEAKGIKELGTLSNLHGSLSVRKLENVTNSFEASQANIMDKMYLNKLSFVWSKDAKNHFQSSQSEMDILGKLQPSKNLKMLDIDGYRGTLFPEWVGHPSYQNLTEVSLYGCLNCCILPSLGQLCSLKVLTISKMNMLETIGTEYDNTFSGTYFPSLERLEFFKMSFWKVWHHPHESNVYFPVLKSIVINDCPRLHGDLPSYLPALDTIRIEGCNQLVSSLPRAPAIRRLYIFESNNIALNELPLSLEELDVKGSEVTESVFEAITITPPISLKKLVIRDCSSAISFPRDCLPLSLESLSITNSSNLDFPKPNHGHESLKYLFIDRSCDSLITLPLDTLPNLHHLRIGNCENIESLSVSKVLQNLDAINISDCPKFVSFPGEGLSAPNLSSLYVSNCVNLKSLSCHINTLLPKLVSMSIYECPKLEMFPEGGMPPSFRTILIANCEKLLMSTSLTSMDMLTHLCIDGPCDGVEYFPKKGYVLLPPSLIYLHIYNHSSLHTLDCTGLLHLTSLQALIIRLCPKLENIVGERLPASLIELNIFECPLLKGQYRVKYPQISHIPRIVVDNKWI 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi267g00005 1235 FunFam Probable disease resistance protein At1g61300 151 315 - -
Vivi267g00005 1235 SUPERFAMILY L domain-like 883 1213 - -
Vivi267g00005 1235 Coils Coil 41 61 - -
Vivi267g00005 1235 SUPERFAMILY L domain-like 473 950 - -
Vivi267g00005 1235 Pfam Rx N-terminal domain 10 103 IPR041118 -
Vivi267g00005 1235 Gene3D - 150 315 IPR027417 -
Vivi267g00005 1235 Gene3D - 321 400 IPR042197 -
Vivi267g00005 1235 Pfam NB-ARC domain 171 385 IPR002182 GO:0043531
Vivi267g00005 1235 PANTHER DISEASE RESISTANCE PROTEIN RP 43 879 IPR044974 GO:0006952
Vivi267g00005 1235 Gene3D - 401 485 IPR036388 -
Vivi267g00005 1235 Gene3D Ribonuclease Inhibitor 957 1104 IPR032675 -
Vivi267g00005 1235 SMART LRR_typ_2 583 606 IPR003591 -
Vivi267g00005 1235 SMART LRR_typ_2 630 653 IPR003591 -
Vivi267g00005 1235 PRINTS Disease resistance protein signature 356 370 - -
Vivi267g00005 1235 PRINTS Disease resistance protein signature 189 204 - -
Vivi267g00005 1235 PRINTS Disease resistance protein signature 261 275 - -
Vivi267g00005 1235 PRINTS Disease resistance protein signature 604 620 - -
Vivi267g00005 1235 FunFam Probable disease resistance protein At1g63360 402 486 - -
Vivi267g00005 1235 Gene3D Ribonuclease Inhibitor 525 910 IPR032675 -
Vivi267g00005 1235 Gene3D - 15 127 - -
Vivi267g00005 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 416 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi267g00005 190 374 WRKY Transcription Factor Family AT5G45050 28.061 2.47e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi267g00005 - - cam:101511364 1540.01