Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi266g00014 ATGGACTCATCCTCCTCTTCACCCCCCACAAACACTAACAACACCTCCCTCGCTTTCTCTCTTTCCAACCACTTCCCTAATCCTCCACACTCCTCTTCCTCTCACCTCTCTCTCTTCCACTCCTTCACCCCTTATCCTCCCTCAACTCCATCTCTCACCCTCACAGGCTCGCCGGAGCCAACTGACAGAGGAACCACCAACCTCTCCATATTCAGCGGCGGAAACAAGCTCGAGAATTTTCTAGGAAACTCCACCGCCACAGCAAGAACCACCGCCACCACATATGCACCCACAGAACTTCACCGTCTTTCCACCGACATATACGATTATGAACTGAAAAAAACCATAGCCGCTTGCTTCCCTCATGGCTACCCTACCGAACCAAACTCCGAACCTCCAAAACCTTCCCCCAAGAAAACCGTCGACACCTTCGGCCAACGCACCTCCATTTACCGTGGCGTCACCCGACATAGATGGACGGGAAGATATGAAGCTCATTTATGGGACAATAGTTGCAGAAGAGAAGGACAAAGTAGAAAAGGAAGACAAGTTTATTTAGGTGGATATGATAAGGAAGAGAAAGCAGCTAGAGCTTATGATCTTGCTGCTCTCAAGTACTGGGGTCCAACTACCACTACCAACTTTCCAATTTGCAACTATGAGAAAGAACTTGATGGCATGAAGAACATGACTAGACAAGAGTTTGTTGCTTCTCTAAGAAGGAAGAGCAGTGGTTTTTCAAGAGGAGCATCAATTTACCGAGGAGTAACAAGACACCACCAGCATGGTAGATGGCAGGCAAGGATAGGTAGAGTTGCCGGAAACAAAGACCTTTACCTTGGCACTTTCAGCACACAAGAAGAAGCTGCTGAAGCTTATGATATAGCAGCAATCAAATTCAGAGGACTAAATGCAGTTACAAACTTCGACATGAGTCGCTACGACGTAAAAAGCATCGCGAATAGTTCTCTCCCCATAGGCGGTTTATCAAATAAAAACAGCAAAATTTCTACTGATCATTCTTTATCAGAAAGCAAAAGACTTGATGTTGCAAGTATATCAGATGAAAGAACTCCATCCACAGCCTTTACAATAACTCAGCAGCCTTCAAATTCTACATTAAGTTTCGCGATTCCGATAAAACAAGATCCTTCTTCAGATTACTGGTCCAATATTCTTGGATTTAATAGTAATAATAGCAATAATAATCCTAGTCATGCTGTTCTTCCATCTTCAACACCCTTCAACATGGATTTTTCTTCGCATGTACCTTCGAATACAAATGGCGATAACAATGGAGGCTTTTTCAGTGGATCAGTTGTTCAGCAGCAACAAAATGGAAACAATTCTTCTTCTTCATCATCATCATCGTCATCTTCAACAAGTTCGATTCCATTTGCTACACCGATATTTTCCTTAAATACTACCAATAGTTATGGAAACAACTGGATCAATAATGGACACACATTCCAAACACATGCAAAATCAAGTCAGTTTCAAACACCAATATTCGGAATGGAATGA 1524 0.4304 MDSSSSSPPTNTNNTSLAFSLSNHFPNPPHSSSSHLSLFHSFTPYPPSTPSLTLTGSPEPTDRGTTNLSIFSGGNKLENFLGNSTATARTTATTYAPTELHRLSTDIYDYELKKTIAACFPHGYPTEPNSEPPKPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPICNYEKELDGMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSSLPIGGLSNKNSKISTDHSLSESKRLDVASISDERTPSTAFTITQQPSNSTLSFAIPIKQDPSSDYWSNILGFNSNNSNNNPSHAVLPSSTPFNMDFSSHVPSNTNGDNNGGFFSGSVVQQQQNGNNSSSSSSSSSSSTSSIPFATPIFSLNTTNSYGNNWINNGHTFQTHAKSSQFQTPIFGME 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi266g00014 507 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 95 425 - -
Vivi266g00014 507 ProSiteProfiles AP2/ERF domain profile. 252 310 IPR001471 GO:0003700|GO:0006355
Vivi266g00014 507 SUPERFAMILY DNA-binding domain 251 312 IPR016177 GO:0003677
Vivi266g00014 507 SUPERFAMILY DNA-binding domain 149 217 IPR016177 GO:0003677
Vivi266g00014 507 SMART rav1_2 150 222 IPR001471 GO:0003700|GO:0006355
Vivi266g00014 507 SMART rav1_2 252 316 IPR001471 GO:0003700|GO:0006355
Vivi266g00014 507 FunFam AP2-like ethylene-responsive transcription factor ANT 149 218 - -
Vivi266g00014 507 Gene3D AP2/ERF domain 150 218 IPR036955 GO:0003700|GO:0006355
Vivi266g00014 507 Gene3D AP2/ERF domain 252 312 IPR036955 GO:0003700|GO:0006355
Vivi266g00014 507 Pfam AP2 domain 150 208 IPR001471 GO:0003700|GO:0006355
Vivi266g00014 507 Pfam AP2 domain 252 302 IPR001471 GO:0003700|GO:0006355
Vivi266g00014 507 CDD AP2 149 217 IPR001471 GO:0003700|GO:0006355
Vivi266g00014 507 MobiDBLite consensus disorder prediction 1 21 - -
Vivi266g00014 507 FunFam AP2-like ethylene-responsive transcription factor 251 312 - -
Vivi266g00014 507 ProSiteProfiles AP2/ERF domain profile. 150 216 IPR001471 GO:0003700|GO:0006355
Vivi266g00014 507 PRINTS Ethylene responsive element binding protein signature 292 312 IPR001471 GO:0003700|GO:0006355
Vivi266g00014 507 PRINTS Ethylene responsive element binding protein signature 151 162 IPR001471 GO:0003700|GO:0006355
Vivi266g00014 507 MobiDBLite consensus disorder prediction 419 463 - -
Vivi266g00014 507 CDD AP2 251 312 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi266g00014 104 507 AP2-EREBP Transcription Factor Family AT5G57390 57.437 6.13e-150 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Vivi266g00014 AP2 3.8e-13 CL0081