Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi266g00011 ATGGAGGAAAAAAGAGCGCTTGTATATGAAATATCTAATGATGGTGCATCCGAGGTGCTGCAGTCGTGGAGCCGTCAAGAGATTTTGCAAATCTTGTGTGCTGAGATGGGAAAAGAAAGGAAGTATACTGGGCTGACAAAGTTGAAAATTATCGAAAATCTTCTGAAAATTGTTTCTGAAAAGAAATCAGGCGGCCATGATATTGCCACAGACCCTGAATCACATTCTTTTCCAGCAACTGGCCAGAAACCTGCTAAAAGGCAGAGAAAAACTGAGAATCCATCTCGATTGGCTGCTCCTGAAAACAATGTTATAGTCAATAATGGTGGTGATGTGAGTAACAATACAACTTACTGCAAAAACTCCGCATGCAAGGCTACCCTAAATCAAGGAGATGCATTTTGTAAAAGATGTTCATGTTGTATTTGTCATCAATATGATGACAACAAAGACCCTAGCCTGTGGCTAATATGCAGTTCTGAAGCTCCATTTCCTGGTGTTTCCTGCGGCTTGTCATGTCACCTTGAGTGTGCTTTAAAACATGATGGTTCTGGAATTGGCAAAGACGGTGAACGCACCAAACTTGATGGAAACTTCTACTGTGTCTCTTGTGGGAAAGTAAATGACTTACTCGGATGCTGGCGAAAACAAGTGATGGTAGCAAAGGATGCTAGACGTGTGGACATACTCTGTTATCGTGTCTCCTTAAGCCAAAAACTTTTGAAAGGGACAGAAAAGCATGTAGAACTTTATAAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGAAGTGGGTCCACTGACTGGCTCACCATTGAAGATTGGTAGGGGGATTGTGAACAGGCTTTCTTCAGGACCCGAGGTTCAGAGACTCTGCGGTGTTGCTCTTGAATCACTTGATTCAATACTTTCTAGAAGGTTCTTGCCTCCATCACCCAATCAAACTATTCAAGATGCAAGTTTACTAACTCCAAATATAAATATGGTAAAGTTCGAAGATGTCACCGCAACATCCCTCACTGTTCTTTTGTGTTTGGAAGATTCTTCTGGAGAAAATAATGCCGGTTACGCCGTGTGGCATCGTAAAGCCGGTGATGTGAACTATCCATTGGACCCGACTTGCACAACTCTCCTACCAAATAGAAAGCTGAGCATCAGGGATCTACTTCCAGCTACAGAATACAGTTTGAAATTTGTTTCCAATGATTTGAGGAAGTCACGTATGTGCGAAGTTCAAGTCTCAACAGAGCATGGTGAGGATGACGTCCCAAATTGCTCAGCAACGGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGCCTTTCCAATCCCTCATCTGTGGAAGATGAAACTAATCATAGCGACCAGACTGATAATCGATCAGATAATTATCCTTCTTATCACAAGGATAGTGACCAGCTTGCTTCTGGTAATCAATCAAATGATGTTATTAATTGTTCCAAATTGGGTGGAGTGGGACTTCCCACCGATACAGATTCCTTGTCAGACAAGCAAGCTGCTGTGGGAATGACTAGCAACACAATACCTAGTTCAGATGTACTAAAGCTTGAAAACAAGCATTCACAAGAGGAACAAGTAACTGAGGACATAAGCACTGATGATGGGTCAGTTCCAACGGGAAGGGAGTGTGTGCCGTTAGTAGGTTGCTCAGAAGGGAGCTTGCCTAATACTCCCAGCAGGTTGGAAATACTTAAAGATGGTCTAGGAAAAAGAGGTAGATCCAAATTCAGTAGCAAAGATCTAGAAAAAGGACCTGGGAAAAGGAGTGGCCCTCGAGATGGAAGCAAACCCAAGAAGAGAAGTGGTGAAAGGAAAAACGAGGGCTGCGAGGCTAATGGTTTTCCAGAGCGGGATCTTGAGTATTATGTGAAGGTGATAAGATGGTTAGAGTGTGAAGGACACATTGAGAAGAACTTCAGGCAGAAATTTCTGACATGGTACAGCTTAAGAGCAACCCCTGAAGAAATAAGGATTGTGAAAATATATGTAGATACATTTCTTGAAGATCCAGCTTCTCTTGCAGAGCAACTTGTGGACACCTTCTCCGAATGCATGTCAAACAAGAGATCATCAGTACCCGCAGGGTTCTGCATGAAGCTTTGGCATTGA 2133 0.4271 MEEKRALVYEISNDGASEVLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGHDIATDPESHSFPATGQKPAKRQRKTENPSRLAAPENNVIVNNGGDVSNNTTYCKNSACKATLNQGDAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVSCGLSCHLECALKHDGSGIGKDGERTKLDGNFYCVSCGKVNDLLGCWRKQVMVAKDARRVDILCYRVSLSQKLLKGTEKHVELYKIVDEAVKKLEPEVGPLTGSPLKIGRGIVNRLSSGPEVQRLCGVALESLDSILSRRFLPPSPNQTIQDASLLTPNINMVKFEDVTATSLTVLLCLEDSSGENNAGYAVWHRKAGDVNYPLDPTCTTLLPNRKLSIRDLLPATEYSLKFVSNDLRKSRMCEVQVSTEHGEDDVPNCSATERSQSPVTNCSSLSNPSSVEDETNHSDQTDNRSDNYPSYHKDSDQLASGNQSNDVINCSKLGGVGLPTDTDSLSDKQAAVGMTSNTIPSSDVLKLENKHSQEEQVTEDISTDDGSVPTGRECVPLVGCSEGSLPNTPSRLEILKDGLGKRGRSKFSSKDLEKGPGKRSGPRDGSKPKKRSGERKNEGCEANGFPERDLEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPEEIRIVKIYVDTFLEDPASLAEQLVDTFSECMSNKRSSVPAGFCMKLWH 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi266g00011 710 Pfam PHD - plant homeodomain finger protein 119 238 IPR032881 -
Vivi266g00011 710 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 710 IPR044514 GO:0010048|GO:0040029
Vivi266g00011 710 MobiDBLite consensus disorder prediction 65 101 - -
Vivi266g00011 710 MobiDBLite consensus disorder prediction 469 483 - -
Vivi266g00011 710 MobiDBLite consensus disorder prediction 415 483 - -
Vivi266g00011 710 MobiDBLite consensus disorder prediction 519 549 - -
Vivi266g00011 710 MobiDBLite consensus disorder prediction 452 468 - -
Vivi266g00011 710 MobiDBLite consensus disorder prediction 420 451 - -
Vivi266g00011 710 CDD PHD_VIN3_plant 139 204 - -
Vivi266g00011 710 MobiDBLite consensus disorder prediction 578 618 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi266g00011 1 588 PHD Gene Family AT4G30200 46.080 1.34e-147 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi266g00011 - - gmx:100819331 1145.95